DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and cyp-29A2

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_505847.1 Gene:cyp-29A2 / 179550 WormBaseID:WBGene00011830 Length:503 Species:Caenorhabditis elegans


Alignment Length:533 Identity:178/533 - (33%)
Similarity:275/533 - (51%) Gaps:62/533 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLF----LLVVLLFGAGWIIHLGQADRRRKV-ANLPGPICPPLIGAMQLMLRLN----PKTFIK 56
            |.:|    :.::|.:.|.||..|.:..|..:. :.||||...|:.|.:..::...    |..||.
 Worm     1 MTIFIPISIAIILAYLATWIPTLLKYKRHWQYGSKLPGPPAHPIFGNLGPIVGKKTEDLPSVFIN 65

  Fly    57 VGREYVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSD-GK 120
            ...|...:...:.||.|..::.....:.:....::.|.....|...|:....|||.||||.. |:
 Worm    66 WAAEQRDQGHSVMRVMILGKVYAWPLNGKAAAAIIDSTTETNKGDDYRFFDPWLGGGLLLEGYGE 130

  Fly   121 VWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQ-KANGNTFDVYRSICAAALDIIAETAM 184
            .|...||::||.|||:.|..:.|||:.:|.|.:..|:. .|:|.|.|::..:...|||||:||||
 Worm   131 RWKSHRKMLTPAFHFAKLGGYFEVFNNESKILIDLLSDFSASGETVDIFPYVKRCALDIISETAM 195

  Fly   185 GTKIYAQANESTPYAEAV---NECTALLSWRFMSVYLQVELLFTLTHPHLK-----W------RQ 235
            |.||.||.|....|.:||   |:...|:|:                :||||     |      :.
 Worm   196 GIKIDAQINHDHKYVQAVEGYNKIGVLVSF----------------NPHLKNQFIFWATGYKAQY 244

  Fly   236 TQLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIR 300
            ...:.|::..|.|||::||.|.:..:.       |...|||.|..|| |::|..:...||:::||
 Worm   245 DDYLSTLKSMTEKVIKERRAAHDSGEV-------EKETSKRMMNFLD-LMLSMEESNQLTSEDIR 301

  Fly   301 EEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECV 365
            :|||||||.|||||||:.|:....|:.:|.||.|:.:|:::|.|.|.:..:::.::..|.|::.|
 Worm   302 QEVDTFMFAGHDTTTSSTSWACWNLAHNPNVQEKVYKEMIEVFGDDPNTDITLENVNNLNYLDIV 366

  Fly   366 IKESLRMYPPVPIVGRKLQTDFKYTHSVHGDG-VIPAGSEIIIGIFGVHRQPETFPNPDEFIPER 429
            :|||.|:..|||.:.|||..|.:.      || ::|||..:.|....:|.....|.||.||.|:|
 Worm   367 LKESKRIIAPVPALQRKLTNDLEI------DGYIVPAGGNVTISPMVLHSNHHVFKNPTEFNPDR 425

  Fly   430 H--ENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLP---MGQRVECIVNIVL 489
            .  :..|:..|:..:||.||||||||||||||..|:|::.|||.:::.|   ......|: .:|.
 Worm   426 FLPDEVSKRHPYDFMPFLAGPRNCIGQKFAQLNEKVMISHIVRNFKIEPTLKYNDTKPCL-EVVT 489

  Fly   490 RSETGFQLGMRKR 502
            :...|..:.:.:|
 Worm   490 KPSNGIPVRLIRR 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 159/452 (35%)
cyp-29A2NP_505847.1 p450 37..495 CDD:278495 167/488 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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