DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and Cyp3a13

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus


Alignment Length:499 Identity:133/499 - (26%)
Similarity:238/499 - (47%) Gaps:67/499 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLLVVLLFGAGWIIH-----LGQADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVGRE 60
            |||...:|||:..|...|     ||          :|||...|.:|.    :....|.|.:...:
Mouse    13 MLLATSLVLLYLYGTHSHGIFKKLG----------IPGPKPLPFLGT----ILAYQKGFWECDIQ 63

  Fly    61 YVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQ--EHLVKHPVYKVLGQWLGNGLLLSDGKVWH 123
            ...|:|.:..::...:.::...|.::.:.:|..:  ........:..:| .|...:.:|:.:.|.
Mouse    64 CHKKYGKMWGLYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRRFGPVG-ILKKAISISENEEWK 127

  Fly   124 QRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQ-KANGNTFDVYRSICAAALDIIAETAMGTK 187
            :.|.:::|||....|::...:.:|.:::.|:.:.| ...|....:.....|.::|:|..|:.|..
Mouse   128 RIRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEGKPTSMKDIFGAYSMDVITATSFGVN 192

  Fly   188 IYAQANESTPYAEAVNECTALLSWR-FMSVYLQVEL------LFTLTHPHLKWRQ-----TQLIR 240
            |.:..|...|:.|.:.:   ||.:. |..::|.|.|      :|...:..|..|.     |..:.
Mouse   193 IDSLNNPQDPFVEKIKK---LLKFDIFDPLFLSVTLFPFLTPVFDALNVSLFPRDVISFFTTSVE 254

  Fly   241 TMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEVDT 305
            .|:|..:|  ||.:|.::..|  ||..:......:...||.||              ||..:...
Mouse   255 RMKENRMK--EKEKQRVDFLQ--LMINSQNYKTKESHKALSDV--------------EIVAQSVI 301

  Fly   306 FMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESL 370
            |:|.|::||:|||||.|:.|:.||:||.|:.:||...|  ....|.:...|.:::|::.|:.|:|
Mouse   302 FIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL--PNKAPATYDTLLQMEYLDMVVNETL 364

  Fly   371 RMYPPVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHRQPETFPNPDEFIPER--HEN 432
            |:||....:.|..:||      |..:|: ||.|:.::|..|.:|:.|:.:|.|:||.|||  .:|
Mouse   365 RLYPIAGRLERVCKTD------VEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKN 423

  Fly   433 GSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLP 476
            ...:.|:..:||.:|||||||.:||.:.||:.|.::::.:.:.|
Mouse   424 QDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQP 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 115/429 (27%)
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 123/463 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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