DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and LOC103692784

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_038935978.1 Gene:LOC103692784 / 103692784 RGDID:9252969 Length:337 Species:Rattus norvegicus


Alignment Length:343 Identity:121/343 - (35%)
Similarity:186/343 - (54%) Gaps:27/343 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 VYRSICAAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHL 231
            ::.:|....||.:.:...|.....|.:.| .|..|:.|.::|...|...::|.::.|:..|....
  Rat     1 MFENISLMTLDSLQKCLFGFDSNCQESPS-EYISAILELSSLTIKRSYQLFLYLDFLYYRTADGR 64

  Fly   232 KWRQT-QLIRTMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSK-----RRMALLDVLLMSTVD 290
            ::|:. .|:.:   ||..||.:||:.|..|      ..||.:.||     :.:..:||||::..:
  Rat    65 RFRKACDLVHS---FTDAVIRERRRLLSSQ------GVDEFLESKTKSKSKTLDFIDVLLLAKDE 120

  Fly   291 -GRPLTNDEIREEVDTFMF--EGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVS 352
             |:.|::::||.|.|||||  |.||||.|.||:.|:.|:||||.|...|:|:.::|.......:.
  Rat   121 HGKELSDEDIRAEADTFMFGDESHDTTASTLSWILYNLARHPEYQESCLQEVWELLRDREPEEIE 185

  Fly   353 IRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDG-VIPAGSEIIIGIFGVHRQP 416
            ..||.:|.::...||||||::||...:.|:...|.     |..|| |||.|:..:|.|||:|..|
  Rat   186 WDDLAQLPFLTMCIKESLRLHPPAVDLLRRCTQDI-----VLPDGRVIPKGNICVISIFGIHHNP 245

  Fly   417 ETFPNPDEFIPERHENGSRV--APFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQ 479
            ..:|:|:.:.|.|.:..||.  :|...|||||||||||||.||..|||:.:|..:..:.|||..:
  Rat   246 SVWPDPEVYDPFRFDPESRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRLLPDDK 310

  Fly   480 RVECIVNIVLRSETGFQL 497
            .......|:||:|.|.:|
  Rat   311 EPRRKPEIILRAEGGLRL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 120/341 (35%)
LOC103692784XP_038935978.1 cytochrome_P450 <1..328 CDD:425388 120/341 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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