DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:526 Identity:197/526 - (37%)
Similarity:294/526 - (55%) Gaps:46/526 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLLFGAGWIIHL--------------GQADRRRKVANLPGPI-CPPLIGAMQLMLRLNPKTFIKV 57
            :||:||...:.|              ..|.:.:::.::|... ..||:| ..|.::.|...|.:.
Mouse    13 LLLWGAASAVSLAGATILISIFPMLVSYARKWQQMRSIPSVARAYPLVG-HALYMKPNNAEFFQQ 76

  Fly    58 GREYVLKFGHLQ--RVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSDGK 120
            ...|..:|.||.  ::||....|:....||..|.:|:|.:.:.|..:||.|..|||.|||.|.|.
Mouse    77 LIYYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFLYKFLQPWLGLGLLTSTGS 141

  Fly   121 VWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGNTFDVYRSICAAALDIIAETAMG 185
            .|..|||::||||||:|||.|::|.::|:||.|.:|.:..|...|:.:..|...|||||.|||||
Mouse   142 KWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVNQEAFNCFFYITLCALDIICETAMG 206

  Fly   186 TKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVE---LLFTLTHPHLKWRQTQLIRTMQEFTI 247
            ..|.||:|..:.|...|...:.::..|....:|..:   |:|.....|.:.     ::.:..||.
Mouse   207 KNIGAQSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFKEGRDHKRG-----LKCLHTFTN 266

  Fly   248 KVIEKR---RQALEDQQSKLMDTADEDVGSK-RRMALLDVLLMST-VDGRPLTNDEIREEVDTFM 307
            .||.:|   |:|.||...    .....:.|| :|.|.||:||..| .:|..|:.::|||||||||
Mouse   267 NVIAERVKERKAEEDWTG----AGRGPIPSKNKRKAFLDLLLSVTDEEGNRLSQEDIREEVDTFM 327

  Fly   308 FEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRM 372
            |||||||.:|:::.|:.|..:||||.|:.:|:.:|.|... |||::.||.:|||::|||||:||:
Mouse   328 FEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSH-RPVTLEDLKKLKYLDCVIKETLRV 391

  Fly   373 YPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERH--ENGSR 435
            :|.||:..|.|..|.:.     |...:..|:|.||..:.:||.|..||:|:||.|||.  ||...
Mouse   392 FPSVPLFARSLSEDCEV-----GGYKVTKGTEAIIIPYALHRDPRYFPDPEEFRPERFFPENSQG 451

  Fly   436 VAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQRVECIV--NIVLRSETGFQLG 498
            ..|:..:|||||||||||||||.:|.|.:||.|:|::.:....:|.|..:  :::||...|..:.
Mouse   452 RHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQFWVESNQKREELGLAGDLILRPNNGIWIK 516

  Fly   499 MRKRKH 504
            : ||:|
Mouse   517 L-KRRH 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 179/444 (40%)
Cyp4v3NP_598730.1 CYP4V 76..515 CDD:410773 181/453 (40%)

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