DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and cyp26c1

DIOPT Version :10

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_031761583.1 Gene:cyp26c1 / 100489980 XenbaseID:XB-GENE-1219115 Length:608 Species:Xenopus tropicalis


Alignment Length:626 Identity:137/626 - (21%)
Similarity:222/626 - (35%) Gaps:195/626 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVVLLFGAGWIIHLGQADRRRKVANLP---GPICPPLIGAMQLMLRLNPKTFIKVGREYVLKFGH 67
            ||:||..:..:..|.....|.:.::||   |.:..|..|. .|...:...:|....||   |:|:
 Frog    22 LVLLLAASHQLWSLRWHSTRDRGSSLPLPKGSMGWPFFGE-TLHWLVQGSSFHSSRRE---KYGN 82

  Fly    68 LQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQW-------LG-NGLLLSDGKVWHQ 124
            :.:..:..:.:|....||...::|..:.|||.       .||       || |.|..|.|::..|
 Frog    83 IFKTHLLGKPVIRVTGAENIRKILLGEHHLVS-------TQWPQSTQIILGSNTLSNSIGELHRQ 140

  Fly   125 RRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGNTFDVYRSI-------CAAALD--IIA 180
            :||:::.....:.||.:           :.|:.:..........|.:       ||.||.  |.|
 Frog   141 KRKMMSKVLSSAALESY-----------LPRIHEAVRWEVRSWCRGVGPVSMLSCAKALTFRIAA 194

  Fly   181 ETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLKWRQTQLIRTMQEF 245
            ...:|..:     ..|.:.|.......|:...|.   |.:::.|:.....:|.|.| |.:.|:| 
 Frog   195 RILLGLSL-----TDTQFQELTRTFEQLVENLFC---LPLDIPFSGLRKGMKARDT-LHQYMEE- 249

  Fly   246 TIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVD-GRPLTNDEIREEVDTFMFE 309
                      |::::.||....|.||.        ||.|:.|..: |:.:...|::|.....:|.
 Frog   250 ----------AIKEKLSKRDPDACEDA--------LDYLINSAKEGGKEINMQELKESAIELIFA 296

  Fly   310 GHDTTTSALSFCLHELSRHP--------------------------------------------- 329
            ...||.||.:..:..|.:||                                             
 Frog   297 AFLTTASASTSLVLLLLKHPSAIHKIRQELASHGLSEHCEQCLPATENPNNNILQDNGHQCLTAG 361

  Fly   330 ---------EVQAKMLEEIVQVLGTDRS------------------------------------- 348
                     |.|.|.|.|..:.|.|||:                                     
 Frog   362 CQLPLVMGTEGQVKTLWEQTKQLLTDRTDQDPQNSLSSKNLVNGENRIQEAPCSHDKSNCSPVPG 426

  Fly   349 ------------RPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGV-IP 400
                        :.:|:..|..|.|::||:||.||:.|||....|.....|:.      ||. ||
 Frog   427 KLQNSVFEGTCQQNISLEKLKSLHYLDCVVKEVLRLLPPVSGGYRTALQTFEL------DGYQIP 485

  Fly   401 AGSEIIIGIFGVHRQPETFPNPDEFIPER---HENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMK 462
            .|..::..|...|.....:.|.:.|.|||   ..:..::..|..|||..|.|:|||::.||:.:|
 Frog   486 KGWSVMYSIRDTHETAAVYQNAEMFDPERFSTERDEGKLGRFNYIPFGGGARSCIGKELAQIILK 550

  Fly   463 MMLAKIV--REYEL----LPMGQRVECIVNIVLRSETGFQL 497
            ::..::|  .::||    .|..|.|.     |:....|.||
 Frog   551 ILAMELVTTAKWELATPSFPKMQTVP-----VVHPVDGLQL 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 119/561 (21%)
cyp26c1XP_031761583.1 cytochrome_P450 59..588 CDD:477761 127/589 (22%)

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