DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d8 and XB980013

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_002931492.1 Gene:XB980013 / 100487918 XenbaseID:XB-GENE-980014 Length:516 Species:Xenopus tropicalis


Alignment Length:519 Identity:164/519 - (31%)
Similarity:258/519 - (49%) Gaps:45/519 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLFLLVVLLFGAGWIIHLGQADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVGRE------ 60
            ||.|:::||...|..|.  ....:..:.|.|||....|.|        |...|...|.:      
 Frog    27 LLCLILLLLKACGLFIR--WKSLKDALQNFPGPPKHWLYG--------NANQFRNDGTDMDRILL 81

  Fly    61 YVLKFGHLQRVWI--FNRLLIMSGDAELNEQLLSSQEHLVKHPV-YKVLGQWLGNGLLLSDGKVW 122
            :..|:.....:|:  |...|:::...........|..   |.|. |..|..|:|.|||:..|..|
 Frog    82 WANKYPKAFPLWVGQFFASLVITNPEYAKAAFARSDP---KTPTGYDFLIPWIGKGLLVLSGDTW 143

  Fly   123 HQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKAN-GNTFDVYRSICAAALDIIAETAMGT 186
            .|.|:::||.||:.:|:.:.::....:.:.:.:....:| |...:::..:....||.|.:.|...
 Frog   144 FQHRRLLTPGFHYDVLKPYAKLISDSTKVMLDKWVPFSNKGEPVELFHHVSLMTLDSIMKCAFSY 208

  Fly   187 KIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPH-LKWRQTQLIRTMQEFTIKVI 250
            ....|.:....|.:||.:.:.|...|..:......|::.|: || ..:|:.  .|...:.|.|||
 Frog   209 HSNCQTDNDNSYTKAVYDLSYLTHHRARTFPYHNNLIYYLS-PHGFLFRKA--CRIAHQHTDKVI 270

  Fly   251 EKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMS-TVDGRPLTNDEIREEVDTFMFEGHDTT 314
            ::|:..|::::.      .|.|..||....||:||.: ..:|:.|:::::|.|||||||||||||
 Frog   271 KQRKTLLQNKEE------FEKVKQKRHPDFLDILLCARDENGKGLSDEDLRAEVDTFMFEGHDTT 329

  Fly   315 TSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIV 379
            .|.:|:.|:.::::||.|.|..|||..|||...|  ....||.::.|....||||||:|||||.|
 Frog   330 ASGISWILYCMAKYPEHQQKCREEIRDVLGEKES--FEWEDLNKIPYTTMCIKESLRLYPPVPAV 392

  Fly   380 GRKLQTDFKYTHSVHGDG-VIPAGSEIIIGIFGVHRQPETFPNPDEFIPER--HENGSRVAPFKM 441
            .|:|.....::     || .:||||.|.|.||.:||.|..:.:|:.|.|.|  .||.|:......
 Frog   393 SRELNKPITFS-----DGRSLPAGSVIFINIFCIHRNPTVWKDPEVFDPLRFSSENSSKRHSHAF 452

  Fly   442 IPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLP-MGQRVECIVNIVLRSETGFQLGMRKRKH 504
            :||:|||||||||.||..|:|:.:|..:..|||.| :.:.......:||||:.|..:.::|..:
 Frog   453 VPFAAGPRNCIGQNFAMNELKVAVALTLNRYELSPDLSKAPLKSPQLVLRSKNGIHVYLKKASY 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 146/440 (33%)
XB980013XP_002931492.1 p450 55..508 CDD:278495 155/479 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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