DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d8 and cyp4v2.1

DIOPT Version :9

Sequence 1:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_002934446.1 Gene:cyp4v2.1 / 100485929 XenbaseID:XB-GENE-22069503 Length:523 Species:Xenopus tropicalis


Alignment Length:518 Identity:200/518 - (38%)
Similarity:305/518 - (58%) Gaps:32/518 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLLVVLLFGAGWIIHLGQADRRRKVAN-LPGPICP--PLIGAMQLMLRLNPKTFIKVGREYV 62
            :||.||.:.:..|     |....|:.|:.. :||| .|  |::|. .|.|:.|...|.....|:.
 Frog    18 VLLTLLALSILPA-----LQDYVRKWKLMKPIPGP-GPNYPIVGD-ALFLKPNGGDFFLQMCEFT 75

  Fly    63 LKFGH--LQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHPVYKVLGQWLGNGLLLSDGKVWHQR 125
            ..|..  |.::||.....|:...|:..|.:||:.:|:.|...||.|..|||.|||.|.|:.|..|
 Frog    76 ESFRSEPLIKIWIGPIPFIIVYHADTVEPILSTSKHMDKAYSYKFLHPWLGKGLLTSTGEKWRSR 140

  Fly   126 RKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGNTFDVYRSICAAALDIIAETAMGTKIYA 190
            ||:|||||||:||.:|:||.::||.|.|::|.:..:|.:|:.:..:...|||||:|||||.||.|
 Frog   141 RKMITPTFHFAILSEFLEVMNEQSKILVEKLQKHVDGESFNCFMDVTLCALDIISETAMGRKIQA 205

  Fly   191 QANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHPHLK--WRQTQLIRTMQEFTIKVIEKR 253
            |:|..:.|..|:.:.:.::..|....:|.::..:.    :||  ....:.::.:..||.|.|.:|
 Frog   206 QSNRDSEYVHAIYKMSDIIQRRQKMPWLWLDFFYA----YLKDGKEHDKNLKILHAFTDKAILER 266

  Fly   254 RQALE---DQQSKLMDTADEDVGSKRRMALLDVLLMSTVD-GRPLTNDEIREEVDTFMFEGHDTT 314
            .:.|:   :|:.:..|:..|....|:|.|.||:|||:|.| |..::..:||||||||||||||||
 Frog   267 AEELKKMGEQKKEHCDSDPESDKPKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHDTT 331

  Fly   315 TSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIV 379
            .:||::.|..|..|||.|.::.:|:.:|.|.. .|||::.||.:|:|:|.||||:||:||.||..
 Frog   332 AAALNWSLFLLGSHPEAQRQVHKELDEVFGKS-DRPVTMDDLKKLRYLEAVIKEALRIYPSVPFF 395

  Fly   380 GRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERH--ENGSRVAPFKMI 442
            .|.:..|.    |:.|..| |.|..::|..:.:||.||.||.|:||.|||.  ||.|...|:..|
 Frog   396 ARTVTEDC----SIRGFHV-PKGVNVVIIPYALHRDPEYFPEPEEFRPERFFPENASGRNPYAYI 455

  Fly   443 PFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMGQRVE-CIV-NIVLRSETGFQLGMRKRK 503
            |||||.||||||:||.:|.|::|:.|:|.|.:....:|.: |:: :::||.:.|..:.::.|:
 Frog   456 PFSAGLRNCIGQRFALMEEKVVLSSILRNYWVEASQKREDLCLLGDLILRPQDGMWIKLKNRE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 179/442 (40%)
cyp4v2.1XP_002934446.1 p450 45..509 CDD:365848 190/475 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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