DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and adgre5b.3

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_005160275.1 Gene:adgre5b.3 / 792970 ZFINID:ZDB-GENE-121214-275 Length:756 Species:Danio rerio


Alignment Length:576 Identity:107/576 - (18%)
Similarity:207/576 - (35%) Gaps:193/576 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSQSEAVIPGCDYF-DTVDISHIPK---------------LNDSYAYEELIIPAHLTG------- 56
            ::||:.:...||.| ...|..:.|:               |||.:.       .|.|.       
Zfish   191 NNQSKCIEMSCDQFKPEPDAGNTPEKLKHLMSLLMNSCKSLNDPHG-------EHFTAEKLLENL 248

  Fly    57 ------LYTFRQLADGSQ-----EPVKSHLRACICKLKPCIRFCCPRNKM-MPNSRCSDGLTENL 109
                  |.:...:|||..     :.|::.:|....:||.      |..|| ..|:.....:|.| 
Zfish   249 CNSTDDLLSEGNVADGETLSVFLDAVENSMRLIGPQLKD------PVTKMETQNTYAEVAVTRN- 306

  Fly   110 KRINPYLKITLEDGT----------IGKYY-------LLT--DMIVLRYEFRYCEKVVS-VQEDQ 154
             :..|...:||..|:          :||.|       |::  ||......|....:..| |:|.|
Zfish   307 -QTPPSGSVTLSTGSAHFNTSWETVVGKSYPGFAFVALVSYKDMNSSSDLFNSMAREKSDVKEKQ 370

  Fly   155 --YKLYEN--GSFMIKPD----------------------------VNWTLSKQWY--------- 178
              |||...  .:.:..||                            |.|:.|::.:         
Zfish   371 ITYKLNSKVVTAVVSNPDTKHLSKPVTLIFTHEEKRAESEGVAYSCVYWSESERGWSGRGCELAW 435

  Fly   179 ---------CLHPRLEDPNSIWILEHVYIPK---SMPAVPQVG-TISMVGCILTIAVYLYIKKLR 230
                     |.|     .:|..:|..:|..:   .:..:.:|| .:|::..||.|..:.:.:.::
Zfish   436 SNSTHTACSCSH-----LSSFAVLMALYPVEDTFELVVITRVGLVLSLICLILCILTFRFCRSIQ 495

  Fly   231 NLLGKCFICYVFCKFVQYLIWAGGDLNLWNNI-CSLAGYTNYFFALASHFWLSVMSHQIWKNLRL 294
            .......:....|.|:..|::..|..:..|.: |::.....:||.|::..|:.:...|:::.:.|
Zfish   496 GTRNSIHLHLSVCLFIADLVFLCGISSTHNQVACAIVAGLLHFFFLSAFCWMLLEGVQLYRMVVL 560

  Fly   295 INRDERSYHFLIYNIY----GWGTPAIMTAITYLVDWAWEDRPDKLNWIP-GVGLYR-CWINTYD 353
            :      :|..:.::|    |:|.|.::.:|:.:.             :| |.|..| ||::...
Zfish   561 V------FHTTLKHLYMYAVGYGVPLVIVSISAIA-------------VPKGYGTDRHCWLSLEG 606

  Fly   354 WSAMIYLYGPMLILSLFNVVTFILTV--------------NHIMKIKSSVKSSTQQQRKCIQNND 404
            : .::..:.|:.|:.:.|:..||:||              :.:.||:|.:.::..|  .|:....
Zfish   607 Y-LILSFFIPVCIIVILNITVFIITVWKLALKFSSLNPDLSKLHKIRSFLATAVAQ--LCVLGGS 668

  Fly   405 FLLYLRLSVMMGVTGISEVITYFVKRHKFWRQVLRVPNFFHLGS--GIVVFVLFIL 458
            ::....|....|    :||:.|.               |..|.|  |.::|::..|
Zfish   669 WVFGFFLFQKNG----TEVMLYL---------------FIILNSLQGALIFIMHCL 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403 51/276 (18%)
7tm_4 211..398 CDD:304433 39/207 (19%)
adgre5b.3XP_005160275.1 EGF_CA 32..>62 CDD:214542
EGF_CA 72..105 CDD:214542
EGF_CA <121..152 CDD:214542
EGF_CA 154..188 CDD:214542
GPS 416..460 CDD:197639 8/48 (17%)
7tm_2 466..699 CDD:278432 51/273 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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