DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and Adgrd1

DIOPT Version :10

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001419043.1 Gene:Adgrd1 / 689257 RGDID:1594795 Length:903 Species:Rattus norvegicus


Alignment Length:385 Identity:83/385 - (21%)
Similarity:141/385 - (36%) Gaps:74/385 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LTENLKRINPYLKITLEDGTIGKYYLLTDMIVLRYEFRYC--------EKVVSVQEDQYKLYENG 161
            |::||.. :|.:.:.|......|.|:.......|. |.||        |.|.|.|         |
  Rat   502 LSQNLSG-SPLITVHLRHKLTQKQYVDATNESNRL-FLYCAFLNFSSGEGVWSSQ---------G 555

  Fly   162 SFMIKPDVNWTLSKQWYCLHPRLEDPNSIWILEHVYIPKSMPAVPQV--GTISMVGC-------- 216
            ..:.:.::.:::.   :|.|     ..:..||..| :|..:....||  .:||.|||        
  Rat   556 CALTEGNLTYSVC---HCTH-----LTNFAILMQV-VPLKLTLGHQVALSSISYVGCSLSVLCLA 611

  Fly   217 --ILTIAVYLYIKKLRNLLGKCFICYVFCKFV-QYLIWAGGDLNLWNNICSLAGYTNYFFALASH 278
              ::|.||...:..:||..........|...| |.|:.....:......|.:.....::|.|.:.
  Rat   612 ATLVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFSMEPGTVPCQVLAVLLHYFFLTAF 676

  Fly   279 FWLSVMSHQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAITYLVDWAWEDRPDKLNWIPGVG 343
            .|:.|....::..:..:...|.|.|...|.| |||.|.::..|:.      ....|..    |.|
  Rat   677 AWMLVEGLHLYSMVIKVFGSEDSKHLYYYGI-GWGCPLLICIISV------SSSMDSY----GTG 730

  Fly   344 LYRCWINTYDWSAMIYLY-GPMLILSLFNVVTFILTVNHIMKIKS-SVK-----SSTQQQRKCIQ 401
             ..||::..  |..|:.: ||.|::.:.|:|..:.....|..|.: |.|     |:.:...|.:.
  Rat   731 -DSCWLSVE--SGAIWAFVGPALLVIVVNIVILVAVTRVISHISTDSYKIHGDPSAFKLTAKAVA 792

  Fly   402 NNDFLLYLRLSVMMGVTGISEVITYFVKRHKFWRQVLRVPNFFHLGSGIVVFVLFILKRS 461
              ..|..|..|.:.||..:|:....|  ::.|        ...:...|:.:|:...|..|
  Rat   793 --VLLPILGTSWVFGVLAVSDRALVF--QYMF--------AILNSSQGLFIFLFHCLLNS 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Methuselah_N 25..195 CDD:429053 20/97 (21%)
7tmB3_Methuselah-like 211..471 CDD:410632 59/269 (22%)
TM helix 2 234..256 CDD:410632 4/22 (18%)
TM helix 3 264..291 CDD:410632 4/26 (15%)
TM helix 4 304..324 CDD:410632 7/19 (37%)
TM helix 5 353..382 CDD:410632 7/29 (24%)
TM helix 6 400..427 CDD:410632 6/26 (23%)
TM helix 7 435..460 CDD:410632 3/24 (13%)
Adgrd1NP_001419043.1 Laminin_G_3 <199..273 CDD:463865
GPS 537..584 CDD:197639 12/64 (19%)
7tm_GPCRs 592..851 CDD:475119 61/275 (22%)
TM helix 1 595..619 CDD:410628 6/23 (26%)
TM helix 2 631..652 CDD:410628 4/20 (20%)
TM helix 3 662..684 CDD:410628 4/21 (19%)
TM helix 4 703..719 CDD:410628 6/16 (38%)
TM helix 5 738..761 CDD:410628 7/24 (29%)
TM helix 6 788..810 CDD:410628 6/23 (26%)
TM helix 7 814..839 CDD:410628 5/34 (15%)
Blue background indicates that the domain is not in the aligned region.

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