DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and Adgrl4

DIOPT Version :10

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_071630.1 Gene:Adgrl4 / 64124 RGDID:621136 Length:738 Species:Rattus norvegicus


Alignment Length:456 Identity:93/456 - (20%)
Similarity:163/456 - (35%) Gaps:155/456 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 PRNKMM--PNSR------CSDGLTENLKRINPYLKITLEDGTIGKYYLLTDMIVLRYEFRYCEKV 147
            ||.|..  ||..      |...:...|...:.:|.....|.:.||..:::.:|           .
  Rat   331 PRRKSAYDPNGNVIVAFLCYRSIGPLLSSSDDFLLGAQSDNSKGKEKVISSVI-----------S 384

  Fly   148 VSVQEDQYKLYENGSFMIKPDVNWTLSKQWYCLHPRLEDP----------------NSIWI---- 192
            .|:..:...|||      ...:.:|||      |.:|.|.                |..|.    
  Rat   385 ASISSNPPTLYE------LEKITFTLS------HVKLSDKHQTQCAFWNYSVDDMNNGSWSSEGC 437

  Fly   193 ----------------LEHVYIPKS------------MPAVPQVG----TISMVGCILTIAVYLY 225
                            |.|..|..|            :..:.|:|    .|.:..||.|...:..
  Rat   438 ELTYSNDTHTSCRCSHLTHFAILMSPSTSIEVKDYNILTRITQLGIIISLICLAICIFTFWFFSE 502

  Fly   226 IKKLRNLLGKCFICYVFCKFVQYLIWAGGDLNLWNNICS-LAGYTNYFFALASHFWLSVMSHQIW 289
            |:..|..:.|...|.:|...:.:|:  |.::|....:|| :||..:||| ||:..|:.:  ..|:
  Rat   503 IQSTRTTIHKNLCCSLFLAQLVFLV--GININTNKLVCSIIAGLLHYFF-LAAFAWMCI--EGIY 562

  Fly   290 KNLRLINRDERSYHFLIYN---------IYGWGTPAIMTAITYLVDWAWEDRPDKLNWIPGVGLY 345
            ..|.::.        ||||         |:|:.:||::...:..:.:.:            .|..
  Rat   563 LYLIVVG--------LIYNKGFLHKNFYIFGYLSPAVVVGFSASLGYRY------------YGTT 607

  Fly   346 R-CWI---NTYDWSAMIYLYGPMLILSLFNVVTFILTVNHIMKIKSSVK---SSTQQQRKCIQNN 403
            : ||:   |.:.||    ..||..::.|.|::.|.:.:..:.:..:.:|   |..:..|.|.:..
  Rat   608 KVCWLSTENNFIWS----FIGPACLIILVNLLAFGVIIYKVFRHTAGLKPEVSCYENIRSCARGA 668

  Fly   404 DFLLYLRLSVMMGVT---GI-----SEVITYFVKRHKFWRQVLRVPNFFHLGSGIVVFV-LFILK 459
            ..||:|     :|.|   |:     :.|:|.:         :..|.|.|   .|:.:|: |.:|.
  Rat   669 LALLFL-----LGTTWTFGVLHVVHASVVTAY---------LFTVSNAF---QGMFIFLFLCVLS 716

  Fly   460 R 460
            |
  Rat   717 R 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Methuselah_N 25..195 CDD:429053 25/147 (17%)
7tmB3_Methuselah-like 211..471 CDD:410632 63/276 (23%)
TM helix 2 234..256 CDD:410632 5/21 (24%)
TM helix 3 264..291 CDD:410632 10/27 (37%)
TM helix 4 304..324 CDD:410632 8/28 (29%)
TM helix 5 353..382 CDD:410632 7/28 (25%)
TM helix 6 400..427 CDD:410632 8/34 (24%)
TM helix 7 435..460 CDD:410632 7/25 (28%)
Adgrl4NP_071630.1 EGF_CA 57..90 CDD:214542
EGF_CA 107..140 CDD:214542
GAIN 186..361 CDD:465137 7/29 (24%)
GPS 416..460 CDD:460350 4/43 (9%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 417..467 6/49 (12%)
7tmB2_ETL 472..729 CDD:320553 65/292 (22%)
TM helix 1 474..499 CDD:320553 6/24 (25%)
TM helix 2 508..530 CDD:320553 5/23 (22%)
TM helix 3 539..566 CDD:320553 10/29 (34%)
TM helix 4 578..598 CDD:320553 4/19 (21%)
TM helix 5 615..644 CDD:320553 8/32 (25%)
TM helix 6 660..687 CDD:320553 8/31 (26%)
TM helix 7 691..716 CDD:320553 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.

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