DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl6 and adgrg6

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001356058.1 Gene:adgrg6 / 561970 ZFINID:ZDB-GENE-041014-357 Length:1208 Species:Danio rerio


Alignment Length:288 Identity:68/288 - (23%)
Similarity:107/288 - (37%) Gaps:64/288 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 ISMVGC-------ILTIAVYLYIKKLR-----NLLGKCFICYVFCKFVQYLIWAGGDLNLW---- 259
            |:.:||       ..|:..|:..:|||     .:|.......:|...| :|      |:.|    
Zfish   822 ITYIGCGISAIFSAATLLTYIAFEKLRRDYPSKILMNLSTSLLFLNMV-FL------LDGWLASY 879

  Fly   260 --NNICSLAGYTNYFFALASHFWLSVMS-HQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAI 321
              ..:|.......:||.|.|..|:.:.| |.....:::.|...|.| .|.:.|.|||.||.:..|
Zfish   880 EIKELCVTVAVFLHFFLLTSFTWMGLESIHMYIALVKVFNTYIRRY-ILKFCIVGWGVPAAIVGI 943

  Fly   322 TYLVDWAWEDRPDKLNWI----PGVGLYR-CWI-NTYDWSAMIYLYGPMLILSLFNVVTFILTVN 380
            ...|.   :|...| |:.    .|.|... ||| |...:......|  ..|:.|.||..||:.:.
Zfish   944 VLAVS---KDSYGK-NYYGKGKDGQGTSEFCWILNPVVFYVTCVAY--FSIIFLMNVAMFIVVMI 1002

  Fly   381 HIMKIKSSVKSSTQQQRKCIQNNDFLLYLR----LSVMMGVT-GISEVITYFVKRHKFWRQV--- 437
            .|........:.|.::       |.|..||    |:.::|:| |.:    :|.     |..|   
Zfish  1003 QICGRNGKRSNRTLRE-------DILRNLRSVVSLTFLLGMTWGFA----FFA-----WGPVSLA 1051

  Fly   438 -LRVPNFFHLGSGIVVFVLFILKRSTFQ 464
             :.:...|:...|:.:||.....:...|
Zfish  1052 FMYLFTIFNSLQGLFIFVFHCALKENVQ 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403
7tm_4 211..398 CDD:304433 52/211 (25%)
adgrg6NP_001356058.1 CUB 41..146 CDD:278839
LamG 153..336 CDD:354964
GPS 756..801 CDD:334696
7tmB2_GPR126 816..1086 CDD:320662 68/288 (24%)
TM helix 1 818..843 CDD:320662 5/20 (25%)
TM helix 2 853..875 CDD:320662 5/28 (18%)
TM helix 3 886..913 CDD:320662 7/26 (27%)
TM helix 4 928..944 CDD:320662 6/15 (40%)
TM helix 5 975..998 CDD:320662 5/24 (21%)
TM helix 6 1021..1046 CDD:320662 8/33 (24%)
TM helix 7 1050..1075 CDD:320662 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.