DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and adgrv1

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_009300028.1 Gene:adgrv1 / 415105 ZFINID:ZDB-GENE-040624-6 Length:6208 Species:Danio rerio


Alignment Length:554 Identity:106/554 - (19%)
Similarity:179/554 - (32%) Gaps:191/554 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LADGSQEPVKSHLRACICKLKPCIRFCCPRNKMMPNSRCSDG---LTENLKRINPYLKITLEDGT 124
            |::..|.|:|...|....:|     .|...|   ||...:.|   |:|..:|....|...::.|.
Zfish  5576 LSNAEQTPLKDSSRGLTYEL-----LCAMAN---PNRTDTQGVSQLSEVAERFAYSLLTDIKCGA 5632

  Fly   125 IGK----------YYLL-------------------TDMIVLR-------------------YEF 141
            .||          |:.:                   ||...|.                   |:.
Zfish  5633 EGKRGITILDNCPYFTIAAHHWYPMQINGHTFIGKNTDTFTLPETLLEVLALPADSTAPSACYKV 5697

  Fly   142 RYCE------------------KVVSVQEDQYKLYENGSFMI-----------------KPDVNW 171
            .:.|                  ||.||     .||..||..:                 ||..:.
Zfish  5698 HFTEYSTEHWFLTNKKPSALNGKVFSV-----SLYGRGSKPLSEGQEVVYRIHTPDRRGKPKPSQ 5757

  Fly   172 TLSKQW------------YCLHPRLEDPNSIWI---LEHVYIPKSMPAVPQV----------GTI 211
            :|...|            :|   ||.|....::   ..|:.|..:...:..:          |.|
Zfish  5758 SLCLLWNQAAESWLSDGQFC---RLVDDTQNYVECACSHLSIYTAYAEIESLASFNEAFYAAGFI 5819

  Fly   212 SMVGCILTIAVYLY--------IKKLRNLLGKCF---ICYVFCKFVQYLIWAGGDLNLWNNICSL 265
            .:.|..|.:..:|.        .|.|.:::..|.   ||::...|...:        ...:.|:.
Zfish  5820 CISGFALAMVSHLMCARFLMFAAKLLTHMMVACLGTQICFLVSAFRGRM--------FSEDSCAA 5876

  Fly   266 AGYTNYFFALASHFWLSVMSHQIWKNLRLINRDERSYHFLIYNIYGWGTPA---IMTAITYLVDW 327
            .|...::|.|:...|:.|.:...|:.| ::|.:.....:|:|.:..||.||   |:..:..|..:
Zfish  5877 LGLFFHYFHLSQFSWMLVQAINFWQIL-VMNDEHTERRYLLYFLLSWGLPALVIIVLVVVLLGGF 5940

  Fly   328 AWEDR------PDKLNWIPGVGLYRCWINTYDWSAMIYLYGPMLILSLFNVVTFILTVNHIMKIK 386
            .|...      ...|.:||.|....|   |.....:|.|.|.::|        ||    |..::.
Zfish  5941 GWSIHSVYGLVQGDLCFIPNVYAALC---TAALVPLICLVGVLVI--------FI----HAYQVT 5990

  Fly   387 SSVKSSTQQQRKCIQNND--FLLYL-RLSVMMGV-TGISEVITYFVKRHKFWRQVLRVPNFFHLG 447
            ...|:.....|....:::  .:||| .|..::.| .|:.....|      .|..:|.|  .|::.
Zfish  5991 QQWKAYDDIYRGRTNSSEVPMMLYLFALVTLVCVWAGLHMAYRY------IWMLILLV--IFNIF 6047

  Fly   448 SGIVVF-VLFILK-------RSTFQMIMERISGP 473
            .|:.|| |.|::.       ::|:.:.|...|.|
Zfish  6048 LGLYVFSVYFVMHNQLFWPGKATYTVEMNGHSSP 6081

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403 41/234 (18%)
7tm_4 211..398 CDD:304433 42/206 (20%)
adgrv1XP_009300028.1 Calx-beta 138..230 CDD:295344
Calx-beta 256..355 CDD:295344
Calx-beta 766..853 CDD:295344
Calx-beta 880..971 CDD:295344
Calx-beta 996..1082 CDD:295344
Laminin_G_3 1343..1484 CDD:290121
Calx-beta 1576..1654 CDD:295344
Calx-beta 1712..1794 CDD:295344
Calx-beta 1849..1939 CDD:295344
Calx-beta 1975..2065 CDD:295344
Calx-beta 2105..2193 CDD:295344
Calx-beta 2220..2310 CDD:295344
Calx-beta 2590..2656 CDD:295344
Calx-beta 2951..3039 CDD:295344
Calx-beta <3574..3614 CDD:295344
Calx-beta 3641..3729 CDD:295344
Calx-beta <3788..3864 CDD:295344
Calx-beta 4021..4112 CDD:295344
Calx-beta 4257..4345 CDD:295344
Calx-beta 4390..4480 CDD:295344
Calx-beta 5003..5085 CDD:295344
7tm_4 <5871..>5926 CDD:304433 13/55 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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