DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl6 and Adgrf3

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_006535799.1 Gene:Adgrf3 / 381628 MGIID:2685887 Length:1059 Species:Mus musculus


Alignment Length:541 Identity:101/541 - (18%)
Similarity:197/541 - (36%) Gaps:148/541 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LNDSYAYEELIIPAHLTGLYTFRQLADGSQEP------VKSHLRACICKLKP------------C 85
            |.|.....:.|:.|:::.|:|..|    :|||      :|: :...:..|:|            .
Mouse   471 LKDLLTTTDKILDANISALWTLAQ----AQEPSMGSDFLKA-VETLVHSLRPQQHPFSFSSANVL 530

  Fly    86 IRFCCPRNKMMPNSRCSDGLTENLKRINPY--LKITLEDGTIGKYYLLTDMIVLRYEFR----YC 144
            ::....|:...|..:.|......|:...|:  |...:..||   ...:|.:::.:.::|    |.
Mouse   531 LQSQLLRHSSPPGYQMSFSTWPLLQARIPWHSLAPLVHSGT---NVSITSLVLQKLDYRLPSNYT 592

  Fly   145 E-------------KVVSVQEDQYKLYENGSFMIKPDVNWTLS---------------------- 174
            :             .|||:..|.....:....|...|:|.||.                      
Mouse   593 QGLWNTPYTTPGLILVVSITADGQAFTQAEVIMDYEDMNGTLHCVFWDHRVFQGQGGWSDEGCEV 657

  Fly   175 -------KQWYCLHPRLEDPNSIWILEHVYIPK--SMPAVPQVGT-ISMVGCILTIAVYLYIKK- 228
                   .|..|.|   ....||.:.:|. :|:  ::..:.|||| .|::..::.:|:|..:.: 
Mouse   658 HAANASITQCICQH---LTAFSILMSQHT-VPENPTLDLLSQVGTGASVLALLVCLAIYGLVWRV 718

  Fly   229 -LRNLLG----KCFICYVFCKFVQYLIWAGGDL---NLWNNICSLAGYTNYFFALASHFWL---- 281
             :||.:.    ......|.|..|....:.|...   ...:.||.:..:..:||.||:.||:    
Mouse   719 VVRNKVAFFRHTTLFNMVICLLVADTCFLGSPFLPSGYHSLICLVTAFLCHFFYLATFFWMLAQA 783

  Fly   282 SVMSHQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAITYLVDWAWEDRPDKLNWIPGV--GL 344
            .|::||:     |....:.|.|.::         ::|..:.||....:          .||  ||
Mouse   784 LVLAHQL-----LFVFHQLSKHVVL---------SLMVMLGYLCPLGF----------AGVTLGL 824

  Fly   345 Y----------RCWINTYDWSAMIYLYG-PMLILSLFNVVTFILTVNHIMKIKSSVKSSTQQQRK 398
            |          :|::|  ....|:|.:. |:|.:...|.:..::.|..:::...|...:.::::.
Mouse   825 YLPQRKYLWEGKCFLN--GGGVMLYSFSEPVLAIVGVNGLVLVIAVLKLLRPSLSEGPTVEKRQA 887

  Fly   399 CIQNNDFLLYLRLSVMMGVTGISEVITYF----VKRHKFWRQVLRVPNFFHLGSGIVVFVLFIL- 458
            .:.....||.  |:.:.|:|....|.|.|    |..:.|        :..:...|:.:.|...| 
Mouse   888 LVGVLKALLI--LTPIFGLTWGLGVATLFDGSIVSHYAF--------SILNSLQGVFILVFGCLT 942

  Fly   459 KRSTFQMIMERISGPRRQQPA 479
            .:...:.:.:|:.|.|....|
Mouse   943 DKKVLEALRKRLRGSRSSNSA 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403 39/223 (17%)
7tm_4 211..398 CDD:304433 40/212 (19%)
Adgrf3XP_006535799.1 HRM 352..398 CDD:367186
GPS 635..678 CDD:366827 4/45 (9%)
7tm_GPCRs 688..954 CDD:391938 57/301 (19%)
TM helix 1 689..714 CDD:341315 7/24 (29%)
TM helix 2 729..751 CDD:341315 4/21 (19%)
TM helix 3 762..789 CDD:341315 7/26 (27%)
TM helix 4 803..823 CDD:341315 5/38 (13%)
TM helix 5 842..871 CDD:341315 6/28 (21%)
TM helix 6 887..914 CDD:341315 7/28 (25%)
TM helix 7 918..943 CDD:341315 5/32 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.