DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and Adgre1

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001007558.1 Gene:Adgre1 / 316137 RGDID:1359214 Length:932 Species:Rattus norvegicus


Alignment Length:446 Identity:92/446 - (20%)
Similarity:165/446 - (36%) Gaps:129/446 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FVISSQSEAVIPGCDYFDTVDISHIPKLNDSYAYEE------LIIPAHLTGLYTFRQLADGSQEP 70
            |:|........||..:   |..:|:..:.|...:|:      |.:.:|:.|.....:..:...:|
  Rat   516 FIIKESESTGTPGVAF---VSFAHMDSVLDERFFEDGQASWKLRMNSHVVGGTVTGERKEDFSKP 577

  Fly    71 V---KSHLRACICKLKPCIRFCCPRNKMMPNSRCSDGLTENLKRINPYLKITLEDGTIGKYYLLT 132
            :   ..|::              |:.| ...|.|....|:            :|||         
  Rat   578 IVYTLQHIQ--------------PKQK-SERSICVSWNTD------------VEDG--------- 606

  Fly   133 DMIVLRYEFRYCEKVVSVQEDQYKLYENGSFMIKPDVNWTLSKQWYCLHPRLEDPNSIWILEHVY 197
                 |:....||.|.:.:                       ....|...|:.:...|.....:.
  Rat   607 -----RWTPSGCETVEASE-----------------------THTVCSCNRMTNLAIIMASGELT 643

  Fly   198 IPKSMPAVPQVGT-ISMVGCILTIAVYLYIKKLRNLLGKCFICYVFCKFVQYLIWAGG-DLNLWN 260
            :..|:..:..||| ||:|...|.||.:|..:.::|......:....|.|:..:::..| |.....
  Rat   644 MEFSLYIISYVGTVISLVCLALAIATFLLFRAVQNHNTYLHLHLCVCLFLAKILFLTGIDKTDNQ 708

  Fly   261 NICS-LAGYTNYFFALASHFWL---SVMSHQIWKNLRLINR-DERSYHFLIYNIYGWGTPAIMTA 320
            ..|: :||:.:|.| ||..||:   :||...:.:||:::|. ..|:...|....:|:|.|.::..
  Rat   709 TACAIIAGFLHYLF-LACFFWMLVEAVMLFLMVRNLKVVNYFSSRNIKMLHLCAFGYGLPVVVVI 772

  Fly   321 ITYLVDWAWEDRPDKLNWIPGVGLY-RCWINT---YDWSAMIYLYGPMLILSLFNVVTFILTVNH 381
            |:..|. .|           |.|:: |||:||   :.||.:    ||         |..|:|:| 
  Rat   773 ISATVH-PW-----------GYGMHNRCWLNTETGFIWSFL----GP---------VCMIITIN- 811

  Fly   382 IMKIKSSVKSST---QQQRKCIQNNDF-------LLYLRLSVMMGVTGISEVITYF 427
                 |::.:.|   .:|:.|..|::.       ||..:....:.:.|.|.|:..|
  Rat   812 -----SALLAWTLWVLRQKLCSVNSEVSKLKDTRLLTFKAIAQIFILGCSWVLGIF 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403 24/180 (13%)
7tm_4 211..398 CDD:304433 52/199 (26%)
Adgre1NP_001007558.1 EGF_CA 33..63 CDD:238011
EGF_CA 81..>109 CDD:214542
EGF_CA 133..172 CDD:214542
EGF_CA 173..>203 CDD:214542
EGF_CA 222..255 CDD:214542
cEGF 245..275 CDD:289433
EGF_CA 272..>301 CDD:214542
EGF_CA 319..359 CDD:284955
Cell attachment site. /evidence=ECO:0000255 507..509
GPS 592..641 CDD:197639 13/97 (13%)
7tm_2 646..886 CDD:278432 64/249 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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