DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and Pdfr

DIOPT Version :10

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster


Alignment Length:286 Identity:59/286 - (20%)
Similarity:102/286 - (35%) Gaps:98/286 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 YIPKSMPAVPQVG---------------TISMVG-C------ILTIAVYLYIKKLRNLLGK---- 235
            |.|:.:..:.|:|               |:.:|| |      |:::.::...:.|||...|    
  Fly   283 YKPEIIRLMQQMGSKDFDAYIDIARRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTKIHKN 347

  Fly   236 CFICYVFCKFVQYLIW------------AGGDLNLWNN---ICSLAGYTNYFFALASHF-WLSVM 284
            .|:..|....::..::            ....|::..|   :|. |.|....:|..:.| |:.:.
  Fly   348 LFVAMVLQVIIRLTLYLDQFRRGNKEAATNTSLSVIENTPYLCE-ASYVLLEYARTAMFMWMFIE 411

  Fly   285 SHQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAITYLVDWAWEDRPDKLNWIPGVGLYRC-- 347
            ...: .|:..:...:.|:....::..||..|.:||.:     ||                 ||  
  Fly   412 GLYL-HNMVTVAVFQGSFPLKFFSRLGWCVPILMTTV-----WA-----------------RCTV 453

  Fly   348 -----------W---INTYDWSAMIYLYGPMLILSLFNVVTFILTVNHI----MKIKSSVKSSTQ 394
                       |   :..|.|    .|.||.|.:.|.|   |...||.|    ||::.|..|..:
  Fly   454 MYMDTSLGECLWNYNLTPYYW----ILEGPRLAVILLN---FCFLVNIIRVLVMKLRQSQASDIE 511

  Fly   395 QQRKCIQNNDFLLYLRLSVMMGVTGI 420
            |.||.::....||.|     :|:|.:
  Fly   512 QTRKAVRAAIVLLPL-----LGITNL 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Methuselah_N 25..195 CDD:429053
7tmB3_Methuselah-like 211..471 CDD:410632 54/257 (21%)
TM helix 2 234..256 CDD:410632 3/37 (8%)
TM helix 3 264..291 CDD:410632 5/27 (19%)
TM helix 4 304..324 CDD:410632 5/19 (26%)
TM helix 5 353..382 CDD:410632 10/28 (36%)
TM helix 6 400..427 CDD:410632 5/21 (24%)
TM helix 7 435..460 CDD:410632
PdfrNP_001245501.1 HRM 213..272 CDD:397086
7tmB1_PDFR 306..584 CDD:320389 55/263 (21%)
TM helix 1 308..333 CDD:320389 5/24 (21%)
TM helix 2 342..364 CDD:320389 3/21 (14%)
TM helix 3 391..418 CDD:320389 5/28 (18%)
TM helix 4 430..450 CDD:320389 7/41 (17%)
TM helix 5 469..498 CDD:320389 12/35 (34%)
TM helix 6 512..539 CDD:320389 8/26 (31%)
TM helix 7 546..571 CDD:320389
Blue background indicates that the domain is not in the aligned region.

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