DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl6 and Adgrg6

DIOPT Version :10

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_218313.7 Gene:Adgrg6 / 308376 RGDID:1308551 Length:1248 Species:Rattus norvegicus


Alignment Length:552 Identity:110/552 - (19%)
Similarity:194/552 - (35%) Gaps:191/552 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LNILAIILVFVISSQSEAVIPGCDYFDTVDISHIPKLNDSY-----------AYEELIIPAHL-- 54
            :||....|...:||    ::||.:......|. :|..||||           ....:|:|.:|  
  Rat   670 VNIETQNLALGVSS----LMPGTNAPSNFSIG-LPSNNDSYFQMDFENGQADPLASVILPPNLLE 729

  Fly    55 --------------------TGLYTFRQLADGSQEPV-KSHLRACICKLKPCIRFCCPRNKMMPN 98
                                |||  |:.:  |||..: .|::.|                     
  Rat   730 NLSPEDSILVRRAQFTFFNKTGL--FQDV--GSQRKILVSYVMA--------------------- 769

  Fly    99 SRCSDGLTENLKRINPYLKITLEDGTIGKYYLLTDMIVLRYEFRYCEKVVSVQEDQYKLYENGSF 163
              ||.|            .||:::        |.|.:.::.:....::|.......:.|.:|.||
  Rat   770 --CSIG------------NITIQN--------LKDPVQIKIKHTRTQEVHQPICAFWDLNQNKSF 812

  Fly   164 MIKPDVNWTLSKQWYCL-HPRLEDPNSIWILEH-------VYIPKSMPAVPQVGT-----ISMVG 215
                 ..|..|.   |: |...:...:|.:..|       :.:|:|...:....|     |:.:|
  Rat   813 -----GGWNTSG---CVAHSDSDAGETICLCNHFTHFGVLMDLPRSASQIDGRNTKVLTFITYIG 869

  Fly   216 C-------ILTIAVYLYIKKLR-----NLLGKCFICYVFCKFVQYLI--W------AGGDLNLWN 260
            |       ..|:..|:..:|||     .:|.......:|...: :|:  |      ||       
  Rat   870 CGISAIFSAATLLTYVAFEKLRRDYPSKILMNLSSALLFLNLI-FLLDGWITSFGVAG------- 926

  Fly   261 NICSLAGYTNYFFALASHFWLSVMS-HQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAI--- 321
             :|:......:||.||:..|:.:.: |.....:::.|.....| .|.:.|.|||.||::.:|   
  Rat   927 -LCTAVAALLHFFLLATFTWMGLEAIHMYIALVKVFNTYIHRY-ILKFCIIGWGLPALVVSIILV 989

  Fly   322 ------TYLVDWAWEDRPDKLNWI--PGVGLYRCWINTYDWSAMIYLYGPMLILSLFNVVTFILT 378
                  .|..:...:|:.|:..||  |.|....|             .|...|:...||..||:.
  Rat   990 SRKQNEVYGKESYGKDQDDEFCWIQDPVVFYVSC-------------AGYFGIMFFLNVAMFIVV 1041

  Fly   379 VNHIMKIKSSVKSSTQQQRKCIQNNDFLLYLR----LSVMMGVT-GISEVITYFVKRHKFWRQVL 438
            :..|.. ::..:|:...:.:.::|      ||    |:.::|:| |.:    :|.     |.. |
  Rat  1042 MVQICG-RNGKRSNRTLREEVLRN------LRSVVSLTFLLGMTWGFA----FFA-----WGP-L 1089

  Fly   439 RVPNFFHLGS------GIVVFVLFILKRSTFQ 464
            .:| |.:|.|      |:.:|:.....:...|
  Rat  1090 NIP-FMYLFSIFNSLQGLFIFIFHCAMKENVQ 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Methuselah_N 25..195 CDD:429053 35/204 (17%)
7tmB3_Methuselah-like 211..471 CDD:410632 64/297 (22%)
TM helix 2 234..256 CDD:410632 5/29 (17%)
TM helix 3 264..291 CDD:410632 6/27 (22%)
TM helix 4 304..324 CDD:410632 8/28 (29%)
TM helix 5 353..382 CDD:410632 6/28 (21%)
TM helix 6 400..427 CDD:410632 7/31 (23%)
TM helix 7 435..460 CDD:410632 7/30 (23%)
Adgrg6XP_218313.7 CUB 38..146 CDD:238001
LamG 178..337 CDD:473984
GPS 799..844 CDD:460350 10/52 (19%)
7tm_GPCRs 859..1127 CDD:475119 65/303 (21%)
TM helix 1 862..886 CDD:410628 5/23 (22%)
TM helix 2 896..917 CDD:410628 3/21 (14%)
TM helix 3 929..951 CDD:410628 5/21 (24%)
TM helix 4 971..987 CDD:410628 6/15 (40%)
TM helix 5 1016..1039 CDD:410628 7/35 (20%)
TM helix 6 1065..1087 CDD:410628 7/30 (23%)
TM helix 7 1091..1116 CDD:410628 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.