DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and Adgrg6

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_218313.7 Gene:Adgrg6 / 308376 RGDID:1308551 Length:1248 Species:Rattus norvegicus


Alignment Length:552 Identity:110/552 - (19%)
Similarity:194/552 - (35%) Gaps:191/552 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LNILAIILVFVISSQSEAVIPGCDYFDTVDISHIPKLNDSY-----------AYEELIIPAHL-- 54
            :||....|...:||    ::||.:......|. :|..||||           ....:|:|.:|  
  Rat   670 VNIETQNLALGVSS----LMPGTNAPSNFSIG-LPSNNDSYFQMDFENGQADPLASVILPPNLLE 729

  Fly    55 --------------------TGLYTFRQLADGSQEPV-KSHLRACICKLKPCIRFCCPRNKMMPN 98
                                |||  |:.:  |||..: .|::.|                     
  Rat   730 NLSPEDSILVRRAQFTFFNKTGL--FQDV--GSQRKILVSYVMA--------------------- 769

  Fly    99 SRCSDGLTENLKRINPYLKITLEDGTIGKYYLLTDMIVLRYEFRYCEKVVSVQEDQYKLYENGSF 163
              ||.|            .||:::        |.|.:.::.:....::|.......:.|.:|.||
  Rat   770 --CSIG------------NITIQN--------LKDPVQIKIKHTRTQEVHQPICAFWDLNQNKSF 812

  Fly   164 MIKPDVNWTLSKQWYCL-HPRLEDPNSIWILEH-------VYIPKSMPAVPQVGT-----ISMVG 215
                 ..|..|.   |: |...:...:|.:..|       :.:|:|...:....|     |:.:|
  Rat   813 -----GGWNTSG---CVAHSDSDAGETICLCNHFTHFGVLMDLPRSASQIDGRNTKVLTFITYIG 869

  Fly   216 C-------ILTIAVYLYIKKLR-----NLLGKCFICYVFCKFVQYLI--W------AGGDLNLWN 260
            |       ..|:..|:..:|||     .:|.......:|...: :|:  |      ||       
  Rat   870 CGISAIFSAATLLTYVAFEKLRRDYPSKILMNLSSALLFLNLI-FLLDGWITSFGVAG------- 926

  Fly   261 NICSLAGYTNYFFALASHFWLSVMS-HQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAI--- 321
             :|:......:||.||:..|:.:.: |.....:::.|.....| .|.:.|.|||.||::.:|   
  Rat   927 -LCTAVAALLHFFLLATFTWMGLEAIHMYIALVKVFNTYIHRY-ILKFCIIGWGLPALVVSIILV 989

  Fly   322 ------TYLVDWAWEDRPDKLNWI--PGVGLYRCWINTYDWSAMIYLYGPMLILSLFNVVTFILT 378
                  .|..:...:|:.|:..||  |.|....|             .|...|:...||..||:.
  Rat   990 SRKQNEVYGKESYGKDQDDEFCWIQDPVVFYVSC-------------AGYFGIMFFLNVAMFIVV 1041

  Fly   379 VNHIMKIKSSVKSSTQQQRKCIQNNDFLLYLR----LSVMMGVT-GISEVITYFVKRHKFWRQVL 438
            :..|.. ::..:|:...:.:.::|      ||    |:.::|:| |.:    :|.     |.. |
  Rat  1042 MVQICG-RNGKRSNRTLREEVLRN------LRSVVSLTFLLGMTWGFA----FFA-----WGP-L 1089

  Fly   439 RVPNFFHLGS------GIVVFVLFILKRSTFQ 464
            .:| |.:|.|      |:.:|:.....:...|
  Rat  1090 NIP-FMYLFSIFNSLQGLFIFIFHCAMKENVQ 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403 36/213 (17%)
7tm_4 211..398 CDD:304433 47/218 (22%)
Adgrg6XP_218313.7 CUB 38..146 CDD:238001
LamG 178..337 CDD:304605
GPS 799..844 CDD:280071 10/52 (19%)
7tm_4 861..1108 CDD:304433 62/287 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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