DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and Adgrg3

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_038954076.1 Gene:Adgrg3 / 291854 RGDID:1305674 Length:574 Species:Rattus norvegicus


Alignment Length:511 Identity:92/511 - (18%)
Similarity:178/511 - (34%) Gaps:117/511 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DTVDISHIPKLNDSYA---YEEL---IIPAHLTGLYTFRQLADGSQEPVKSHLRACICKLKPCIR 87
            :|||:..:..|..:.:   .|:|   ::|:.:.     ||:..|..:|..              |
  Rat   115 ETVDMPFVKALIQNISTDVSEDLLYSLVPSQIP-----RQVMRGEDQPAD--------------R 160

  Fly    88 FCCPRNKM--MPNSRCSDGLTENLKRINPYLKI----TLEDGTIGKYYLLTDMIVLRYEFRYCEK 146
            ...|::..  :|.:|.:..|...:..|.|....    .|||.  |...|...|:.|.....:...
  Rat   161 VRLPKSLFGALPGNRSAVRLAITILNIGPGNVFKGPRLLEDK--GSSVLNNRMVGLSVGQMHATG 223

  Fly   147 VVSVQEDQYKLYENGSFMIKPDVNWTLSKQWYCLHPRLEDP---NSIWILEHVYI---------- 198
            :....|..:........:|...|.|.::|..:..|....:|   .::...:|:..          
  Rat   224 LSEPVEITFSHQHQSPNVILTCVFWDMAKGDWDSHGCSTEPGDGRTVCRCDHLTFFALLLRPTLD 288

  Fly   199 ---PKSMPAVPQVGT-ISMVGCILTIAVYLYIK------------KLRNLLGKCFICYVFCKFVQ 247
               .:::..:.|.|: :||:....|:.:|:..:            |:...|...    :|...:.
  Rat   289 QATARTLTRISQAGSAVSMIFLAFTMVLYVAFRFSLQRFKSEDAPKIHMALSTS----LFLLNLT 349

  Fly   248 YLIWAGGDLNLWNNICSLAGYTNYFFALASHFWLSVMSHQIWKNLRLINRDERSYHFLIYNIYGW 312
            :||..|.........|.:.....::|.|....|:.:.:..::..:..:......::||..::.||
  Rat   350 FLINVGSGSQGPPASCWVRAAIFHYFLLCVFTWMGLEAFHLYLLVIKVFNTYFGHYFLKLSLLGW 414

  Fly   313 GTPAIM-----TAITYLVDWAWEDRPDKLNWIPGVGLYRCWINTYDWSAMIY--LYGPMLILSLF 370
            |.|.::     ::.:|.| :...|:.::      ..|..||   :.....:|  ::|..|:..||
  Rat   415 GLPVLIVIGVGSSNSYGV-YTIRDQENR------TSLELCW---FQKEPALYATVHGYFLVTFLF 469

  Fly   371 NVVTFILTVNHIMKIKSSVKSSTQQQR-KCIQNNDFLLYLRLSVMMGVT---------GISEVIT 425
            ..|...:....|..:.|......|.|. |.:     |..|.||.::|:|         |:|.|..
  Rat   470 GAVVLAMVAWKIFTLPSVTAGKGQGQTWKSV-----LTVLGLSSLVGMTWGLAVLTPLGLSTVYI 529

  Fly   426 YFVKRHKFWRQVLRVPNFFHLGS--GIVVFVLFILKRSTFQMIMERISGPRRQQPA 479
            :.:                 |.|  |:.:|..||:.....|......||..|...|
  Rat   530 FTL-----------------LNSLQGLFIFCWFIILYFPTQSTTTSSSGTARLDQA 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403 33/182 (18%)
7tm_4 211..398 CDD:304433 36/206 (17%)
Adgrg3XP_038954076.1 GPS 244..282 CDD:396408 6/37 (16%)
7tm_GPCRs 292..551 CDD:421689 54/294 (18%)
TM helix 1 294..319 CDD:410628 6/24 (25%)
TM helix 2 333..355 CDD:410628 5/25 (20%)
TM helix 3 366..393 CDD:410628 3/26 (12%)
TM helix 4 406..426 CDD:410628 6/19 (32%)
TM helix 5 454..481 CDD:410628 6/26 (23%)
TM helix 6 495..522 CDD:410628 8/31 (26%)
TM helix 7 524..549 CDD:410628 8/41 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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