DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and lat-2

DIOPT Version :10

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001040724.1 Gene:lat-2 / 173771 WormBaseID:WBGene00002252 Length:1338 Species:Caenorhabditis elegans


Alignment Length:274 Identity:58/274 - (21%)
Similarity:119/274 - (43%) Gaps:44/274 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 IPKSMPAVPQVG-TISMVGCILTIAVYLYIKKLRNLLGKCFICYVFCKFVQYLIWAGGDLNLWNN 261
            :..::..|..:| .||:|...|::.|:.:.:.|:|:..........|..:..|::..|.....|.
 Worm   893 LASALDVVSTIGCAISIVCLALSVCVFTFFRNLQNVRNSIHRNLCLCLLIAELVFVIGMDRTGNR 957

  Fly   262 I-CSLAGYTNYFFALASHFWLSVMSHQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAITYLV 325
            . |.:.....::|.|:|..|:.:..:|::..|..:....|:..||.| ::.:||||::.||:..:
 Worm   958 TGCGVVAILLHYFFLSSFCWMLLEGYQLYMMLIQVFEPNRTRIFLYY-LFCYGTPAVVVAISAGI 1021

  Fly   326 DWAWEDRPDKLNWIPGVGLYRCWINTYD---WSAMIYLYGPMLILSLFNVVTFILTVNHIMKIKS 387
              .|||.        |...| |||:|..   |:    ...|::::...|::..::.:..::.::|
 Worm  1022 --KWEDY--------GTDSY-CWIDTSTPTIWA----FVAPIIVIIAANIIFLLIALKVVLSVQS 1071

  Fly   388 SVKSSTQQQRKCIQNNDFLLYLR--------LSVMMGVTGISEVITYFVKRHKFWRQVLRVPNFF 444
            ..::...:....::.:..||.|.        |:.:.|.||     |.|.     |     :....
 Worm  1072 RDRTKWGRIIGWLKGSATLLCLLGITWIFGFLTAVKGGTG-----TAFA-----W-----IFTIL 1121

  Fly   445 HLGSGIVVFVLFIL 458
            :...||.:|||.::
 Worm  1122 NCTQGIFIFVLHVV 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Methuselah_N 25..195 CDD:429053
7tmB3_Methuselah-like 211..471 CDD:410632 56/260 (22%)
TM helix 2 234..256 CDD:410632 3/21 (14%)
TM helix 3 264..291 CDD:410632 5/26 (19%)
TM helix 4 304..324 CDD:410632 9/19 (47%)
TM helix 5 353..382 CDD:410632 3/31 (10%)
TM helix 6 400..427 CDD:410632 8/34 (24%)
TM helix 7 435..460 CDD:410632 5/24 (21%)
lat-2NP_001040724.1 CLECT 52..193 CDD:214480
Gal_Rha_Lectin_LAT2 228..322 CDD:438697
HormR 479..542 CDD:214468
GAIN 556..>660 CDD:465137
GPS 837..884 CDD:197639
7tmB2_latrophilin-like_invertebrate 895..1149 CDD:320556 58/272 (21%)
TM helix 1 896..921 CDD:320556 7/24 (29%)
TM helix 2 930..952 CDD:320556 3/21 (14%)
TM helix 3 961..988 CDD:320556 5/26 (19%)
TM helix 4 1000..1020 CDD:320556 9/20 (45%)
TM helix 5 1037..1066 CDD:320556 3/32 (9%)
TM helix 6 1079..1106 CDD:320556 4/26 (15%)
TM helix 7 1112..1137 CDD:320556 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

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