DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and LOC108181087

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_021329169.1 Gene:LOC108181087 / 108181087 -ID:- Length:166 Species:Danio rerio


Alignment Length:180 Identity:36/180 - (20%)
Similarity:69/180 - (38%) Gaps:53/180 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 YFFALASHFWLSVMSHQIWKNLRLINRDERSYHFLIYNIYGWGTPAIMTAIT-------YLVDWA 328
            :.|.:|:..|:.|....:|..:..:|..| ..|...|.:.|||.|.::..||       |..|. 
Zfish     2 HLFFMAAFSWMLVEGLLLWSKVVSVNLSE-DRHMKYYYLIGWGLPVLIVTITLASASGKYTADG- 64

  Fly   329 WEDRPDKLNWIPGVGLYRCWINTYD---WSAMIYLYGPMLILSLFNVVTFILTVNHIMKIKSSVK 390
                             .||::..:   |.    ..||::.:.:.|::  |||...::.|.::.:
Zfish    65 -----------------HCWLSVQNGVIWG----FAGPVIFIIMVNIM--ILTRVVVITIATAKR 106

  Fly   391 SS-------------TQQQRKCIQNNDFLLYLRLSVMMGVTGISEVITYF 427
            .|             ::|.|..::     ..|.|..::|:|.:..|:..|
Zfish   107 RSLMMALNNSPEEQISEQIRAAVK-----AVLVLLPILGLTWLCGVLVPF 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403
7tm_4 211..398 CDD:304433 29/149 (19%)
LOC108181087XP_021329169.1 7tm_GPCRs <1..166 CDD:333717 36/180 (20%)
TM helix 4 36..52 CDD:320095 5/15 (33%)
TM helix 5 71..94 CDD:320095 5/28 (18%)
TM helix 6 126..151 CDD:320095 6/29 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1153592at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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