DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl6 and adgre13

DIOPT Version :9

Sequence 1:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_021327151.1 Gene:adgre13 / 100538238 ZFINID:ZDB-GENE-150505-3 Length:303 Species:Danio rerio


Alignment Length:297 Identity:64/297 - (21%)
Similarity:111/297 - (37%) Gaps:92/297 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 MVGCILTIAVYLYIKKLRN----LLGKCF-----ICYVFCKFVQYLIWAGGDLNLWN-NICSLAG 267
            |:.|||..|....:..:.|    ::|..|     :.:.||:      |..|..|:.. |||....
Zfish     1 MLTCILRAAKNDSLLNVLNVVCVIVGLLFFSLALLTFAFCQ------WGPGVNNVARINICISLL 59

  Fly   268 YTNYFFALASHFWLSVMSHQ-------------------IW------------KNLRLINRDERS 301
            ..:..|.|...| ||::..|                   :|            |||..|:..:|:
Zfish    60 LAHLLFLLTQQF-LSLIRRQQMLCEVISGLLHFLFLSGFVWMFIEAVLLFICVKNLSQISSQKRN 123

  Fly   302 YHFLIYNIY----GWGTPAIMTAITYLVDWAWEDRPDKLNWIP-GVGLYRCWINT---YDWSAMI 358
               ::.||:    |:....::..|:..|             :| |.|..:|||..   :.||.: 
Zfish   124 ---VLRNIFLCVIGYAVALVVVGISAAV-------------VPKGYGSEKCWIKMDKGFIWSFL- 171

  Fly   359 YLYGPMLILSLFNVVTFILTVNHIMKIKSSVKSSTQQQRKCIQ--NNDFLLYLRLSVMMGVTGIS 421
               ||:.::...||:.||       .|..|:||:.::....:.  |...::..:......|.|.|
Zfish   172 ---GPVTVILALNVILFI-------GIGVSLKSAFKKLNADVSQLNQTKIIMFKTLAQFVVLGCS 226

  Fly   422 EVITYFVKRHKFWRQVLRVPNFFHLGS--GIVVFVLF 456
            .::.:|....|    ||.: .|..|.|  |..:|:::
Zfish   227 WILGFFTNSSK----VLEI-LFLILNSQQGTFIFLIY 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl6NP_788473.1 Mth_Ecto 25..197 CDD:119403
7tm_4 211..398 CDD:304433 51/233 (22%)
adgre13XP_021327151.1 7tm_GPCRs 12..274 CDD:333717 59/286 (21%)
TM helix 1 15..39 CDD:320095 3/23 (13%)
TM helix 2 48..69 CDD:320095 6/20 (30%)
TM helix 3 83..105 CDD:320095 1/21 (5%)
TM helix 4 129..145 CDD:320095 1/15 (7%)
TM helix 5 163..186 CDD:320095 6/26 (23%)
TM helix 6 210..233 CDD:320095 3/22 (14%)
TM helix 7 237..262 CDD:320095 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1153592at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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