DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8541 and CG8543

DIOPT Version :10

Sequence 1:NP_648127.1 Gene:CG8541 / 38838 FlyBaseID:FBgn0035788 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_648126.1 Gene:CG8543 / 38837 FlyBaseID:FBgn0035787 Length:219 Species:Drosophila melanogaster


Alignment Length:289 Identity:154/289 - (53%)
Similarity:173/289 - (59%) Gaps:84/289 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFRY-LISLCALVACANAGLLA---SHVA--------IANPSVDAVASTQQNVVRSFAGTVSSY 53
            |||:| |:|.||||..|:||.||   ::.|        :|.|..|||.:|||||||||.||||:|
  Fly     1 MAFKYVLLSFCALVGVASAGFLAPATTYAAASIPVVAKVAQPHYDAVGTTQQNVVRSFGGTVSTY 65

  Fly    54 SKAVDTPYSSVRKSDTRIQNNVYTPAIKTTTYGAAPLYTQATPIVSKTLVHAPAPVVEKTVYAAA 118
            ||.|.||||||.|.|:||.||||||                     |||..|||||:.|:.||||
  Fly    66 SKNVVTPYSSVSKVDSRITNNVYTP---------------------KTLYSAPAPVITKSFYAAA 109

  Fly   119 PAPVLAKTVYSAPAPVVAKHVYSAPAQVYAPAAPVVAKTVYSAPA--PVYAAPAPVYAAPAPVVA 181
            ||||:||||||||   |||.||:|||.|||..||||||||||||.  .|||||||||:|||||||
  Fly   110 PAPVVAKTVYSAP---VAKAVYAAPAPVYAAPAPVVAKTVYSAPVAKAVYAAPAPVYSAPAPVVA 171

  Fly   182 KTVYSAPAPVLAKTVYSAPAPVYAASAPAVAKTVSYAAPLATTNVNHGPAATTYTHNAPALGVSS 246
            |||||||||     ||.||||:.||:                      |||              
  Fly   172 KTVYSAPAP-----VYHAPAPLVAAA----------------------PAA-------------- 195

  Fly   247 YGSSQTVHYSPAESVSHMSFDGFGTHWGF 275
                 .|.||||..|:|.||||||:|||:
  Fly   196 -----YVKYSPAAVVAHASFDGFGSHWGY 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8541NP_648127.1 Cuticle_3 33..275 CDD:431611 135/243 (56%)
CG8543NP_648126.1 Cuticle_3 43..219 CDD:431611 135/245 (55%)

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