DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk26 and Asic1

DIOPT Version :9

Sequence 1:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_006257440.1 Gene:Asic1 / 79123 RGDID:71062 Length:559 Species:Rattus norvegicus


Alignment Length:599 Identity:122/599 - (20%)
Similarity:212/599 - (35%) Gaps:141/599 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PPCAANQWKRAALMARMAPAFRETVSDDSEDEVDTKKQIKYGS----GFQAAKAIIHEYCDYTTI 80
            |...|:.|         .|.......|.||.|.:.:|:::.||    |..:.:.:: .:.:..|:
  Rat    18 PGSMADIW---------GPHHHRQQQDSSESEEEEEKEMEAGSELDEGDDSPRDLV-AFANSCTL 72

  Fly    81 HGIRYLGEKKRPLLERLFW--ISVLVLSVFTCVKLTLNIWDK---WNNNPVIVSFAEKSTPVWQI 140
            ||..::..:..|...:..|  ..|:.|..|.|     .:.|:   :.:.|.:....|.:|.  ::
  Rat    73 HGASHVFVEGGPGPRQALWAVAFVIALGAFLC-----QVGDRVAYYLSYPHVTLLDEVATT--EL 130

  Fly   141 PFPAVTVCPETKTRREIFNFTDSYHQVRDFQSNVSGIVDLSDKQKGLY--GAVSQVCEP-HLHDV 202
            .|||||.|.....|....::.|..     :.:.:.|:.:..|....|.  |..:...|| :||  
  Rat   131 VFPAVTFCNTNAVRLSQLSYPDLL-----YLAPMLGLDESDDPGVPLAPPGPEAFSGEPFNLH-- 188

  Fly   203 TLGNKTRRGMEIIDALTEVSPHFDDTYLNCKWRNSPVKCSDIFHKF---VTEDGVCFSFNSLSPA 264
            ...|::...:|             |..|.|.:...|  |..  |.|   .|..|.|::|||    
  Rat   189 RFYNRSCHRLE-------------DMLLYCSYCGGP--CGP--HNFSVVFTRYGKCYTFNS---- 232

  Fly   265 EIFRAEGIIPDFIFREENRLSMDWNVEDGYSASADTSPYPNRVLGPGARAGLYLFMGGAEIDFDD 329
                                            ..|..|....:.| |...||.:.:   :|..|:
  Rat   233 --------------------------------GQDGRPRLKTMKG-GTGNGLEIML---DIQQDE 261

  Fly   330 MCRGPV----------QGFKILLHTPGDVAQVSKQYFRIPFDQEVLISIRP---KIITTSDGLKH 381
            ..  ||          .|.|:.:|:..:.          ||..::...:.|   ..::..:....
  Rat   262 YL--PVWGETDETSFEAGIKVQIHSQDEP----------PFIDQLGFGVAPGFQTFVSCQEQRLI 314

  Fly   382 YEPNRRQCYFQKERELRYFNIYSQSNCELECLANFTLTKCGCVKFSMPRNVNMPVCGDASLK-CY 445
            |.|:..........:..:|:.||.:.|.::|...:.:..|.|....||.:.  |.|.....| |.
  Rat   315 YLPSPWGTCNAVTMDSDFFDSYSITACRIDCETRYLVENCNCRMVHMPGDA--PYCTPEQYKECA 377

  Fly   446 NQAEDELLLREFTQGLVNAGENTRGETECNCLPSCTSIAYEAEISQADFDYKTVINTDSPE-GKE 509
            :.|.|.|:.::              :..|.|...|....|..|:|......|......:.: .|.
  Rat   378 DPALDFLVEKD--------------QEYCVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKS 428

  Fly   510 EQSKRQGMKMSRVSIFFKEAQFLTSRRSELYGTTDFLANCGGLLGLFMGVSMLSIVELIYFCTVR 574
            ||  ..|..:..:.|||:...:.|..:.:.|.....|.:.||.:|||:|.|:|:::||..:....
  Rat   429 EQ--YIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDYAYEV 491

  Fly   575 LISNLRMRRKTRKE 588
            :...|..|.|.:||
  Rat   492 IKHRLCRRGKCQKE 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk26NP_648125.3 ASC 74..570 CDD:279230 105/521 (20%)
Asic1XP_006257440.1 ASC 63..541 CDD:295594 110/545 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I5010
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8907
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11690
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.070

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