DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk26 and rpk

DIOPT Version :10

Sequence 1:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster


Alignment Length:579 Identity:264/579 - (45%)
Similarity:374/579 - (64%) Gaps:58/579 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TVSD---DSEDEVDTKKQIKYGSGFQAAKAII---HEYCDYTTIHGIRYLGEKKRPLLERLFWIS 101
            |:||   ||...:|...:.:..:|..|.:..|   ||||..|:|||::||||::||..||:||:.
  Fly     2 TISDSELDSSKGIDLTFRRRRKAGSVACEGFITTYHEYCRNTSIHGVQYLGEQERPFRERIFWLF 66

  Fly   102 VLVLSVFTCVKLTLNIWDKWNNNPVIVSFAEKSTPVWQIPFPAVTVCPETK----------TRRE 156
            |.::|::.|..|..:.:.||...||||||||||||||.|||||||||.|||          |..:
  Fly    67 VFLISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYAD 131

  Fly   157 IFN-FTDSYHQVRDFQ-SNVSGIVDLSDKQKGLYGAVSQVCEPHLHDVTL--GNKTRRGMEIIDA 217
            ::: |::.....|.|: .|||.: ::.:.:..|:...:|:.|   .|:.|  |:    .::..|.
  Fly   132 LYSQFSEDMRASRVFRPENVSAL-EMEEFRTLLHVCNTQIIE---EDIPLIAGD----DLDYFDV 188

  Fly   218 LTEVSPHFDDTYLNCKWRNSPVKCSDIFHKFVTEDGVCFSFNSLSPAEIFRAEGIIPDFIFREEN 282
            |..:.|.||..:..|:|.:...:|...|.|.:||:|:|::||.|...||:|      |..::.::
  Fly   189 LQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTFNGLRATEIYR------DDTYQYQH 247

  Fly   283 R---LSMD--------WNVEDGYSASADTSPYPNRVLGPGARAGLYLFMGGAEIDFDDMCRGPVQ 336
            .   |.|:        |.:|.||:..:|...:|.|||..|||:|::|.:...:.:.|..||||||
  Fly   248 SGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQ 312

  Fly   337 GFK------ILLHTPGDVAQVSKQYFRIPFDQEVLISIRPKIITTSDGLKHYEPNRRQCYFQKER 395
            |||      :|||.|.||.|||||:.|||..:||||:::|.:||.|.|:..|.|.||||:...||
  Fly   313 GFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHER 377

  Fly   396 ELRYFNIYSQSNCELECLANFTLTKCGCVKFSMPRNVNMPVCGDASLKCYNQAEDELLLREFTQ- 459
            .||:|.:|::|||:|||||||||||||||||||||||:|||||:..:.||::||.|||:|||.: 
  Fly   378 SLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVDMPVCGEDKIHCYDRAERELLVREFKRV 442

  Fly   460 GLVNAG-ENTRG-ETECNCLPSCTSIAYEAEISQADFDYKTVINTDSPEGKEEQSKR-QGMKMSR 521
            ..:||| ||:|. |:.|||:|:|||:.|..|||||:||.:.::   ..||..|..|. .|.:|||
  Fly   443 KALNAGRENSRSVESACNCMPACTSLVYNTEISQANFDLEEML---VAEGDTEFLKEYPGSQMSR 504

  Fly   522 VSIFFKEAQFLTSRRSELYGTTDFLANCGGLLGLFMGVSMLSIVELIYFCTVRLISNLR 580
            :||:||::||:||:||||||.|:|||||||:.|||||.|:||:||:||..|:||.:||:
  Fly   505 LSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLK 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk26NP_648125.3 ASC 74..570 CDD:459966 247/530 (47%)
rpkNP_001246909.1 ASC 39..552 CDD:459966 246/529 (47%)

Return to query results.
Submit another query.