DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk26 and mec-4

DIOPT Version :9

Sequence 1:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_510712.2 Gene:mec-4 / 181728 WormBaseID:WBGene00003168 Length:768 Species:Caenorhabditis elegans


Alignment Length:737 Identity:135/737 - (18%)
Similarity:225/737 - (30%) Gaps:275/737 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EYCDYTTIHGIRYLGEKKRPLLERLFWISVLVLSVFTCVKLTLN---IWDKWNNNPVIVSFAEKS 134
            |:|..|:.|||..:||... :..|..|:   ||.:...:.|.||   :.||:|.|..||....|.
 Worm    86 EFCYKTSAHGIPMIGEAPN-VYYRAVWV---VLFLGCMIMLYLNAQSVLDKYNRNEKIVDIQLKF 146

  Fly   135 TPVWQIPFPAVTVC--------------------------------------------------- 148
            ...   ||||:|:|                                                   
 Worm   147 DTA---PFPAITLCNLNPYKASLATSVDLVKRTLSAFDGAMGKAGGNKDHEEEREVVTEPPTTPA 208

  Fly   149 PETK----------------------------------------------TRREIFNFTDSYHQV 167
            |.||                                              |.:::||..|     
 Worm   209 PTTKPARRRGKRDLSGAFFEPGFARCLCGSQGSSEQEDKDEEKEEELLETTTKKVFNIND----- 268

  Fly   168 RDFQSNVSGIVDLSDKQKGLYGAVSQVCEPHLHDVTLGNKTRRGMEIIDALTEVSPHFDD----- 227
                         :|::   :..:.:....|..:..:...|  ||.:::........||:     
 Worm   269 -------------ADEE---WDGMEEYDNEHYENYDVEATT--GMNMMEECQSERTKFDEPTGFD 315

  Fly   228 ----------------TYLNCKWRNSPV-KCSDIFHKFVTEDG----------------VCFSFN 259
                            .:||..|..:.. .|::  |.|.|:|.                .|.::|
 Worm   316 DRCICAFDRSTHDAWPCFLNGTWETTECDTCNE--HAFCTKDNKTAKGHRSPCICAPSRFCVAYN 378

  Fly   260 SLS-PAEIFR-AEGII----PDFI------------------------------FREENRLSMD- 287
            ..: |.||:. .:|..    |:|:                              .::..|||.. 
 Worm   379 GKTPPIEIWTYLQGGTPTEDPNFLEAMGFQGMTDEVAIVTKAKENIMFAMATLSMQDRERLSTTK 443

  Fly   288 -------------WNVEDGYSASADTSPYPNRVLGPGARAGLYLFMGGAEIDFDDMCRGPVQGFK 339
                         .::|..:....|.           |....:.|.....::...:..||:.|.:
 Worm   444 RELVHKCSFNGKACDIEADFLTHIDP-----------AFGSCFTFNHNRTVNLTSIRAGPMYGLR 497

  Fly   340 ILLH---------TPGDVAQVS---KQYFRIPFDQEVLISIRPKIITTSDGLKHYEPNRRQCYF- 391
            :|::         |.....:::   |:.|  ||......| .|....:|.||:..:.:|....: 
 Worm   498 MLVYVNASDYMPTTEATGVRLTIHDKEDF--PFPDTFGYS-APTGYVSSFGLRLRKMSRLPAPYG 559

  Fly   392 -----QKERELRYFNI-YSQSNCELECLANFTLTKCGC--VKFSMPRNVNMPVCGD-ASLKCYNQ 447
                 .|..:..|.|. ||...|...|.....|.:|.|  .:|.:|.|.......| .:.||.:.
 Worm   560 DCVPDGKTSDYIYSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPVPENARHCDAADPIARKCLDA 624

  Fly   448 AEDELLLREFTQGLVNAGENTRGETECNCLPSCTSIAYEAEISQADFDYKTV-INTDSPEGKE-E 510
            ..::|      .||       .|...|.|...|....|....|.|.:...:: |...|..|.. |
 Worm   625 RMNDL------GGL-------HGSFRCRCQQPCRQSIYSVTYSPAKWPSLSLQIQLGSCNGTAVE 676

  Fly   511 QSKRQGMKMSRVSIFFKEAQFLTSRRSELYGTTDFLANCGGLLGLFMGVSMLSIVELIY-FCTVR 574
            .:|......:.|.:|:::..|.....||.||..:.||:.||.|||:.|:|.|:..|.:: |....
 Worm   677 CNKHYKENGAMVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLGLWCGISFLTCCEFVFLFLETA 741

  Fly   575 LIS---NLRMRRKTRKELLKAV 593
            .:|   |..:.:|.:.|..|.:
 Worm   742 YMSAEHNYSLYKKKKAEKAKKI 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk26NP_648125.3 ASC 74..570 CDD:279230 128/708 (18%)
mec-4NP_510712.2 deg-1 86..736 CDD:273309 129/708 (18%)
ASC 87..>172 CDD:279230 27/91 (30%)
ASC <428..739 CDD:295594 72/337 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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