DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk26 and del-6

DIOPT Version :9

Sequence 1:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_741622.2 Gene:del-6 / 179474 WormBaseID:WBGene00011891 Length:577 Species:Caenorhabditis elegans


Alignment Length:570 Identity:112/570 - (19%)
Similarity:201/570 - (35%) Gaps:196/570 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 FWISVLVLSVFTCVKLTLNIWDKWNNNP----VIVSFAEKSTPVWQIPFPAVTVCPETKTRREIF 158
            |...|..|:|.| ||...::::::.:.|    :.:.|.|..|      .|.||.|...:.....|
 Worm    45 FVFIVAFLAVLT-VKDVFDLFEEYFDYPKESDINIVFNESMT------MPNVTFCMSRQQAWSHF 102

  Fly   159 --NFT---DSYHQVRDFQSNVSGIVDLSDKQK---------------GLYGAVSQVCEPH----- 198
              |.|   |.:..|.|  .|::.:.|.....|               ..|.::.:....|     
 Worm   103 KLNLTAPADEWDAVVD--ENLANMTDHDAFMKTPWDYRLVMEAYDMIATYSSLERETTAHGSARS 165

  Fly   199 LH-------------------------DVTLGNKTRR-GMEIIDALTEVSPH--FDD------TY 229
            :|                         .:|....|:: |:|::....:....  |||      |.
 Worm   166 IHVFKNAPRLAAKRKTFKKWRDILDSRGITFDEFTQKTGIEVLRRSMQRFRRRTFDDDETVIKTK 230

  Fly   230 LNCKWRNSPVKC------SDIFHKFVTEDGVCFSFNSLSPAEIFRAEGIIPDFIFREENRLSMDW 288
            |...|.:....|      .|.| |.:.:.||.|.......||  ..||       ::.:.:|:|:
 Worm   231 LRISWISQMQICFQPEFDQDNF-KTIDDQGVFFDMLLSHNAE--NTEG-------QKIDCMSVDF 285

  Fly   289 NVEDGYSASADTSPYPNRVL-GPGARAGLYLFMGGAEIDFDDMCRGPVQGFKILLHTPGDVAQVS 352
            :   |..:|.      ||.: |.|.....|:         |::|.|  |..::..|       |:
 Worm   286 H---GRPSSL------NRFMEGKGRSRDGYV---------DEVCLG--QRHEVTAH-------VT 323

  Fly   353 KQYFRIPFDQEVLISIRPKIITTSDGLKHYEPNRRQCYFQKERELRYFNIYSQSNCELECLANFT 417
            ..|..:..|::                      ..:|...::.|...||  .:|.|.:|.:.:  
 Worm   324 ALYQMLENDEQ----------------------GTRCRDVEDGEDSEFN--CRSRCRMEMIRD-- 362

  Fly   418 LTKCGCVKFS---MPRNVNM---PVCGDASLKCYNQAEDELLLREFTQGLVNAGENTRGETEC-- 474
              .|.|...|   :.:..:|   |:|                  ::||..|:..:....:|||  
 Worm   363 --ACHCTPLSLSYLAKKEDMEIFPLC------------------DYTQCTVDVQKGNYSDTECAN 407

  Fly   475 NCLPSCTSIAYEAEISQADFDYKTVINTDSPEGKEEQSKRQGMKMSRVSIFFKEAQFLTSRRSEL 539
            .|.|.|..|.:|.:              .|.:|:..:.     .::.|.:.:...::||..:...
 Worm   408 KCFPDCRQIRFEVD--------------HSVKGRMLRP-----DLTLVELSWGPFEYLTMEQQWK 453

  Fly   540 YGTTDFLANCGGLLGLFMGVSMLSIVELI-----YFCTVRLISNLRMRRK 584
            |..|.|:|..||.:|:::|:|:||:::|:     ||  .:.|.|.|:.:|
 Worm   454 YSATSFIAALGGSIGMWLGLSILSLIQLVTYSYTYF--TKKIVNERILKK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk26NP_648125.3 ASC 74..570 CDD:279230 106/554 (19%)
del-6NP_741622.2 ASC <347..484 CDD:295594 39/179 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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