DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk26 and asic1

DIOPT Version :9

Sequence 1:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_004912018.1 Gene:asic1 / 100489966 XenbaseID:XB-GENE-977699 Length:525 Species:Xenopus tropicalis


Alignment Length:552 Identity:120/552 - (21%)
Similarity:207/552 - (37%) Gaps:138/552 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VDTKKQIKYGSGFQAAKAIIHEYCDYTTIHGIRYLGEKKRPLLERLFWI----SVLVLSVFTCVK 112
            :|.|:..:.||   .....:..:...:|:||:.::...:|....||.|:    ..|.|.::.|.:
 Frog     1 MDVKEAEELGS---PQPLSVQAFASGSTLHGLAHIFTYERFSCRRLIWVLCFLGSLSLLLYVCTE 62

  Fly   113 LTLNIWDKWNNNPVIVSFAEKSTPVWQIPFPAVTVCPETKTRREIFNFTDSYHQVRDFQSNVSGI 177
            ..:..::    .|.:....|.|||  ::.|||||.|...:.|.......|.|| ..:..|.::..
 Frog    63 RIIYYFE----YPHVTKLDEISTP--RMIFPAVTFCNLNEFRFSRVTKNDLYH-AGELLSLLNNR 120

  Fly   178 VDLSDKQKGLYGAVSQVCEPHLHDVTLGNKT-----------------RRGMEIIDALTEVSPHF 225
            .:|.|         ||:.:..:.:: |.:|.                 |.|.:|.:.|       
 Frog   121 YELPD---------SQLADEKVMEI-LQDKANFRNFKPKPFNMREFYDRTGHDIREML------- 168

  Fly   226 DDTYLNCKWRNSPVKCS-DIFHKFVTEDGVCFSFNSLSPAEIFRAEGIIPDFIFREENRLSMDWN 289
                |:||:|..  :|| |.|....|..|.|::|||                             
 Frog   169 ----LSCKYRGE--ECSVDDFVPVFTRYGKCYTFNS----------------------------- 198

  Fly   290 VEDGYSASADTSPYPNRVLGPGARAGLYLFMGGAEIDFDDMCRGPV----------QGFKILLHT 344
            ..:|.|....|.        .|...||.|.:   :|..|:..  ||          .|.|:.:|:
 Frog   199 GRNGRSPLVTTK--------GGTGNGLELML---DIQQDEYL--PVWGETDETSFEAGIKVQIHS 250

  Fly   345 PGDVAQVSKQYFRIPFDQEVLISIRPKIITTSDGLKHYEPNRRQCYFQKERELRYFNIYSQSNCE 409
            ..:...:.:..|.:....:..:|.:.:.:|      :..|....|. ....:..:|:.||.|.|.
 Frog   251 QDEPPFIDQLGFGVAPGFQTFVSCQEQRLT------YLPPPWGDCK-SSAMDSEFFDTYSISACR 308

  Fly   410 LECLANFTLTKCGCVKFSMPRNVNMPVCGDASL---KCYNQAEDELLLREFTQGLVNAGENTRGE 471
            ::|...:.:..|.|      |.|:||  |||:.   :.|.:..|..|  :|   ||.     :..
 Frog   309 IDCETRYLVENCNC------RMVHMP--GDAAYCTPELYKECADPAL--DF---LVE-----KDN 355

  Fly   472 TECNCLPSCTSIAYEAEISQADFDYKTVINTDSPE-GKEEQSKRQGMKMSRVSIFFKEAQFLTSR 535
            ..|.|...|....|..|:|......|......:.: .|.||...:.:.:  :.|||:...:.|..
 Frog   356 DFCVCETPCNMTRYGKELSMVKIPSKASARYLAKKYNKSEQYIAENILV--LDIFFEALNYETIE 418

  Fly   536 RSELYGTTDFLANCGGLLGLFMGVSMLSIVEL 567
            :.:.|.....|.:.||.:|||:|.|:|:::||
 Frog   419 QKKAYEVAGLLGDIGGQMGLFIGASILTVLEL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk26NP_648125.3 ASC 74..570 CDD:279230 116/530 (22%)
asic1XP_004912018.1 ASC 18..507 CDD:413546 116/532 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.