DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk26 and asic4

DIOPT Version :9

Sequence 1:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_031749131.1 Gene:asic4 / 100486325 XenbaseID:XB-GENE-940165 Length:535 Species:Xenopus tropicalis


Alignment Length:554 Identity:108/554 - (19%)
Similarity:204/554 - (36%) Gaps:144/554 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 DSEDEVDTKKQIKYGSGFQAAKAIIHEYCDYTTIHGIRYLGEKKRPLLERLFW----ISVLVLSV 107
            :.:::.:.:::...|....||...:..:...:|:||:|::.:..|..:::..|    ::.|:..:
 Frog    17 NQKEKEEGERESLIGDEVPAAGRDLAAFASTSTLHGLRHIFQTGRLGIKQSLWALAFLASLLFFL 81

  Fly   108 FTCVKLTLNIWDKWNNNPVIVSFAEKSTPVWQIPFPAVTVCPETKTRREIFNFTDSYHQVRDFQS 172
            :...|..|    .:..:|.:.:..|:  .:.::.|||:|:|...:.|.......|.||     .:
 Frog    82 YQVAKCAL----YYLEHPHVTAVDEE--VMGEMIFPAITICNINRFRHSALTDPDIYH-----LA 135

  Fly   173 NVSGIVDLSDKQKGLYGAVSQVCEPHLHDVTLGNKTRRGMEIIDALTEVSPHFDDTYLNCKWRNS 237
            |::|:.. .|:: |...:.....:|.:.|:.    .|.|.::.:.|...:...|    :|..:|.
 Frog   136 NLTGLPP-KDRE-GHRDSDLMYDDPDMLDIV----NRTGHQLAEMLKSCNFSGD----SCSAQNF 190

  Fly   238 PVKCSDIFHKFVTEDGVCFSFNS-LSPAEIFRAEGI---------------IPDFIFREENRLSM 286
            .|    :|.::    |.|::||: ....::.|..|:               :|  |:||.|..|.
 Frog   191 SV----VFTRY----GKCYTFNADKKHPKVSRQGGMGNGLEIMLDIQQEEYLP--IWRETNETSF 245

  Fly   287 DWNVEDGYSASADTSPYPNRVLGPGARAGLYLFMGGAEIDFDDM------CRGPVQGFKILLHTP 345
            :..:..... |.|..||.:: :|.|...|...|:...|.....:      ||..:.|        
 Frog   246 EAGIRVQIH-SQDEPPYIHQ-MGFGVSPGFQTFVSCQEQRMTYLPQPWGNCRSSIPG-------- 300

  Fly   346 GDVAQVSKQYFRIPFDQEVLISIRPKIITTSDGLKHYEPNRRQCYFQKERELRYFNIYSQSNCEL 410
                                                            |..|..::.||.|.|.|
 Frog   301 ------------------------------------------------EEFLSGYSTYSISACRL 317

  Fly   411 ECLANFTLTKCGCVKFSMPRNVNMPVCGDASLKCYNQAEDELLLREFTQGLVNAGENTRGETECN 475
            :|.....:.||.|....||.|..  :|......|.:...|.::            |:|  ..:|:
 Frog   318 QCEKEAVIRKCACRMVHMPGNET--ICSPVMYMCADHILDNMV------------EDT--SEKCS 366

  Fly   476 CLPSCTSIAYEAEISQADFDYKTVINTDSPE------GKEEQSKRQGMKMSRVSIFFKEAQFLTS 534
            |...|....|..|||..     .:.|..|..      .|.|...|:...:  :.|||:...:.|.
 Frog   367 CPTPCNLTRYSKEISMV-----RIPNKGSARYLARKYNKNETYIRENFLV--LDIFFEALNYETI 424

  Fly   535 RRSELYGTTDFLANCGGLLGLFMGVSMLSIVELI 568
            .:.:.|.....|.:.||.:|||:|.|.|:|:|::
 Frog   425 EQKKAYDLPSLLGDIGGQMGLFIGASFLTILEIL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk26NP_648125.3 ASC 74..570 CDD:279230 105/527 (20%)
asic4XP_031749131.1 ASC 39..514 CDD:413546 105/532 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5830
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4647
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 1 1.100 - - O PTHR11690
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

Return to query results.
Submit another query.