DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphinx2 and ctrl

DIOPT Version :9

Sequence 1:NP_001303408.1 Gene:sphinx2 / 38833 FlyBaseID:FBgn0052382 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001015686.1 Gene:ctrl / 548358 XenbaseID:XB-GENE-5876074 Length:263 Species:Xenopus tropicalis


Alignment Length:269 Identity:66/269 - (24%)
Similarity:106/269 - (39%) Gaps:44/269 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVVALLVLSLTFSVCEKNKLSP------RITGGYRAKPYTIIYLVGIVYAKSPLSSLKFGAGTII 61
            |:..:.::..|:. |....:||      ||..|..|.|.:..:.|.:    ...:...|..|::|
 Frog     6 LLSCIALIGSTYG-CGSPAISPVLSGYARIVNGENAVPGSWPWQVSL----QDSTGFHFCGGSVI 65

  Fly    62 SNQWILTVKEVLIFKYIEAHFG---SKRAFWG-YD------------ILRIYRENFYFHYDKTRI 110
            |:.|::|.          ||.|   :.|...| ||            |.:::|...|..:.....
 Frog    66 SDFWVVTA----------AHCGVTTAHRVILGEYDRSSPAEPIQTKTIAKVFRHPNYNSFTIAND 120

  Fly   111 IALVKCPY-QKFDRRMSRVRVPAYGARFERYVGNMTMVCGWGTDKRKVRL-PTWMRCVEVEVMNN 173
            |.|:|... ..|...::.|.|.:....|..  |...:..|||......|| |..::.|.:.:::|
 Frog   121 ITLLKLSSPASFSNIVAPVCVASSSDAFNG--GERCVTTGWGYVDAASRLTPNKLQQVALPLLSN 183

  Fly   174 TECAKYHTPLKWYEMCTSGEGFKGVCEGDMGGAVVTMGPNPTFI--GIIWLMPTNCSIGYPSVHI 236
            |||.:|........|..:|......|.||.||.:|.. .|..::  ||:....:.||...|.|:.
 Frog   184 TECQRYWGSKILNTMVCAGASGASSCMGDSGGPLVCQ-RNGAWVLAGIVSWGSSTCSPSSPGVYA 247

  Fly   237 RVSDHIKWI 245
            |||....|:
 Frog   248 RVSTLRSWM 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sphinx2NP_001303408.1 Tryp_SPc 25..245 CDD:214473 60/239 (25%)
Tryp_SPc 26..248 CDD:304450 60/240 (25%)
ctrlNP_001015686.1 Tryp_SPc 34..259 CDD:238113 60/240 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434399at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.