DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphinx2 and CG3505

DIOPT Version :9

Sequence 1:NP_001303408.1 Gene:sphinx2 / 38833 FlyBaseID:FBgn0052382 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster


Alignment Length:257 Identity:53/257 - (20%)
Similarity:97/257 - (37%) Gaps:72/257 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YLVGIVYAKSPLSSLKFGAGTIISNQWILTVKEVLIFKYIEAHFGSKRAFWGYDILRI------- 96
            :|..|.|.:.....:....|.:||::::||.          ||..::.|.....|..:       
  Fly   120 WLALIEYTRGNQEKIHACGGVLISDRYVLTA----------AHCVAQAATSNLQITAVRLGEWDT 174

  Fly    97 -------YREN----------------------FYFHYDKTRI--IALVK-CPYQKFDRRMSRVR 129
                   |.|:                      .|...|:|:|  ||||: ....|.:..:..:.
  Fly   175 STNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDFVQPIC 239

  Fly   130 VPAYGARFERYVGNMTMVCGW--GTDKRKVRLPTWMRCVEVEVMNNTEC----AKYHTPLKWYEM 188
            :|....|.:.....:|.|.||  .:.:|       ||...|.:.:..||    |.....::..::
  Fly   240 LPNKQLRADELEDLVTEVAGWQASSSQR-------MRKGYVTISSIEECQRKYASQQLRIQASKL 297

  Fly   189 C--TSGEGFKGVCEGDMGGAVVTMGPNPTFI--GIIWLMPTNC-SIGYPSVHIRVSDHIKWI 245
            |  |:.:    .|.|:.||.:: :..|..::  |::...|..| :..:|.|:.||:.:|.||
  Fly   298 CGLTNSQ----ECYGNAGGPLM-LFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sphinx2NP_001303408.1 Tryp_SPc 25..245 CDD:214473 51/255 (20%)
Tryp_SPc 26..248 CDD:304450 53/257 (21%)
CG3505NP_650380.2 CLIP 30..82 CDD:288855
Tryp_SPc 111..356 CDD:238113 53/257 (21%)
Tryp_SPc 111..354 CDD:214473 51/255 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436356
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.