DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphinx2 and try-4

DIOPT Version :10

Sequence 1:NP_729256.2 Gene:sphinx2 / 38833 FlyBaseID:FBgn0052382 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_508030.4 Gene:try-4 / 185148 WormBaseID:WBGene00006622 Length:324 Species:Caenorhabditis elegans


Alignment Length:307 Identity:60/307 - (19%)
Similarity:92/307 - (29%) Gaps:111/307 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SLTFSVCEKNKLSPRITGGYRAKPYTIIYLV-GIVYA-------------KSPLS----SLKFGA 57
            :::|:|...|:|     ||....||.||... |.:..             |.|.|    |:||..
 Worm    61 AVSFTVDGVNRL-----GGSIISPYHIITAAHGFITTIGSRGNLCENKNWKKPNSSIYRSIKFLR 120

  Fly    58 GT---------------------------IISNQWILTVKEVLIFKYIEAHFGSKRAFWGYDILR 95
            .|                           :|.|:    |:.||    ::..|.|.....|:|...
 Worm   121 DTRKVAYGGTCIRGHTDKYPNDPRCKKSDVIHNK----VRAVL----VDGEFASSNCLKGHDWAI 177

  Fly    96 IYRENFYFHYDKTRIIALVKCPYQKFDRRMSRVRVPAYGARFERYVGN------------MTMVC 148
            :..|......:..|.|.|.: |...:.:.::   ||.:|   ..|:.|            :...|
 Worm   178 VEVEKRIHFSENVRPICLPR-PNMYYTKSLA---VPGWG---RSYIFNESGPLIHEIPMRIDRDC 235

  Fly   149 --GWGTDKRKVRLPT----WMRCVEVEVMNNTECAKYHTPLKWYEMCTSGEGFKGVCEGDMGGAV 207
              .|..     |||.    ::....:.|.|      |..|              ..|.||.||.:
 Worm   236 KRPWSD-----RLPADADDFICATSMNVSN------YSAP--------------RTCHGDSGGGL 275

  Fly   208 VTMGPN---PTFIGIIWLMPTNCSIGYPSVHIRVSDHIKWIKHVSGV 251
            .....|   ...|.|.......|.....:...||..::..|.:.:||
 Worm   276 EYRDDNYGRAFLIAITSFGTRGCPSNMLARFTRVDMYLNLICNYTGV 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sphinx2NP_729256.2 Tryp_SPc 25..245 CDD:473915 53/285 (19%)
try-4NP_508030.4 Tryp_SPc 51..318 CDD:238113 58/301 (19%)

Return to query results.
Submit another query.