DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and RHO1

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_015491.1 Gene:RHO1 / 856294 SGDID:S000006369 Length:209 Species:Saccharomyces cerevisiae


Alignment Length:198 Identity:104/198 - (52%)
Similarity:132/198 - (66%) Gaps:10/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69
            |.|:|||||.|||||||.::...||..|:||||:||.|:|.||.:.:.|.|||||||||||||||
Yeast    12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRP 76

  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKKL 134
            ||||.::|.|||||:..|.|.|||:.||..||.|.|..|||||||.|:|||:|.||||:|:.:..
Yeast    77 LSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQ 141

  Fly   135 TPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVR----------GPKRHKC 189
            .|:|..:|.::|.:|.|..|.||||.|..|::.||:.|.|:.|....:          ..|:.||
Yeast   142 QPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTNGKAKKNTTEKKKKKC 206

  Fly   190 ALL 192
            .||
Yeast   207 VLL 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 98/170 (58%)
RHO1NP_015491.1 RhoA_like 10..184 CDD:206662 98/171 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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