DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and rnd3a

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_955816.1 Gene:rnd3a / 80963 ZFINID:ZDB-GENE-010319-40 Length:243 Species:Danio rerio


Alignment Length:192 Identity:82/192 - (42%)
Similarity:124/192 - (64%) Gaps:4/192 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QAIKC--VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDY 64
            |::||  |||||...|||.||..:..:.||..|:||||:||:|:..:|.:.|.|.||||:|...|
Zfish    20 QSLKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDKQRIELSLWDTSGSPYY 84

  Fly    65 DRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKL 129
            |.:||||||.:|..:|||.:..|.:.::|..||..|::..||:..::|||.|.|||.|..|:.:|
Zfish    85 DNVRPLSYPDSDAVIICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDLTTLVEL 149

  Fly   130 KDKKLTPITYPQGLAMAKEIAAVKYLECSAL-TQKGLKTVFDEAIRSVLCPVVRGPKRHKCA 190
            .:.:.||::|.||.||||:|:| .|:||||: ::..::.:|..|..:.:....:..||:|.|
Zfish   150 SNHRQTPVSYDQGSAMAKQISA-PYIECSAVQSENSVRDIFHVATLACVNKNNKNIKRNKSA 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 77/175 (44%)
rnd3aNP_955816.1 Rnd3_RhoE_Rho8 19..197 CDD:206735 78/177 (44%)

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