DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and Rhoj

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_075764.1 Gene:Rhoj / 80837 MGIID:1931551 Length:214 Species:Mus musculus


Alignment Length:198 Identity:115/198 - (58%)
Similarity:145/198 - (73%) Gaps:14/198 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :||||||||||||||||:||..:|||.||:|||||:|:..|.|..|...|||:||||||||::||
Mouse    22 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLR 86

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKK 133
            |||||.|||||||||:|||||:.||:.:|.||::...|.||.:|:||::|||||.:|:.:|...|
Mouse    87 PLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMK 151

  Fly   134 LTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHK---------C 189
            ..|:||..|:.:||.|.|..|||||||||||||.||||||.::.     .||:.|         |
Mouse   152 EKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAILTIF-----HPKKKKKGCLGCHGCC 211

  Fly   190 ALL 192
            |::
Mouse   212 AII 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 110/171 (64%)
RhojNP_075764.1 P-loop_NTPase 22..195 CDD:304359 110/172 (64%)
RHO 24..197 CDD:197554 109/177 (62%)
Effector region. /evidence=ECO:0000255 50..58 6/7 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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