DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and Rhobtb1

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001074816.1 Gene:Rhobtb1 / 69288 MGIID:1916538 Length:695 Species:Mus musculus


Alignment Length:210 Identity:77/210 - (36%)
Similarity:114/210 - (54%) Gaps:31/210 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY------IPTVF--DNY--------SANVMVDAK 49
            ::.||||||||.|||||.|:.:...|....:|      :|||:  |.|        .:..:||..
Mouse    12 VETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEV 76

  Fly    50 PINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVG 114
            .|:|.||||.|  |:.:.|..:|.::||.::|||:.||.|..:|:..|:.|::|.||..|::|||
Mouse    77 SISLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWYQEIKHFCPRTPVVLVG 139

  Fly   115 TKLDLR-DDKQTIEKLKDKKLTPITY------PQGLAMAKEIAAVKYLECSALTQKGLKTVFDEA 172
            .:|||| .|.:.:.:.:.....||..      .:|..:|||: .:.|.|.|...|.|:|.|||.|
Mouse   140 CQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKEL-GIPYYETSVFDQFGIKDVFDNA 203

  Fly   173 IRSVLCPVVRGPKRH 187
            ||:.|.     .:||
Mouse   204 IRAALI-----SRRH 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 74/195 (38%)
Rhobtb1NP_001074816.1 Rho-like 1..210 75/205 (37%)
RhoBTB 13..207 CDD:133275 74/196 (38%)
BTB_POZ 248..459 CDD:365784
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..351
BTB_POZ 464..589 CDD:365784
BACK_RHOBTB1 592..691 CDD:350605
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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