DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and Rhof

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001385887.1 Gene:Rhof / 690130 RGDID:1584038 Length:211 Species:Rattus norvegicus


Alignment Length:192 Identity:94/192 - (48%)
Similarity:128/192 - (66%) Gaps:3/192 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :|.|:||||..|||.||:.|...:||..|.|:||:.|:|:|.|..|.:.|.|:||||||||||||
  Rat    20 LKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLR 84

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKK 133
            ||||..|.:.|||:.::||.|::||..||||||.|.|..:|::|:|.|.|||.||:.:.||:..:
  Rat    85 PLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQ 149

  Fly   134 LTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIR---SVLCPVVRGPKRHKCALL 192
            |.||||.|||:..:::....||||||..::.::.||.||.:   |.|....|..|:..|.||
  Rat   150 LEPITYTQGLSACEQMRGALYLECSAKFRENVEDVFREATKVALSALKKAQRQKKQRICLLL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 87/174 (50%)
RhofNP_001385887.1 Rho4_like 17..211 CDD:206704 92/190 (48%)

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