DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and Cdc42

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_741991.3 Gene:Cdc42 / 64465 RGDID:71043 Length:191 Species:Rattus norvegicus


Alignment Length:193 Identity:131/193 - (67%)
Similarity:153/193 - (79%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            ||.|||||||||||||||||||||||.||.||:|||||||:..||:..:|..|||:|||||||||
  Rat     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLK 130
            ||||||||||||||:|||:|:|:|||||:.||.||:.||||..|.:||||::|||||..|||||.
  Rat    66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLA 130

  Fly   131 DKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKR-HKCALL 192
            ..|..|||......:|:::.||||:|||||||||||.||||||.:.|.|  ..||: .:|.||
  Rat   131 KNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP--PEPKKSRRCVLL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 122/172 (71%)
Cdc42NP_741991.3 Cdc42 3..177 CDD:206664 122/173 (71%)
Effector region. /evidence=ECO:0000255 32..40 6/7 (86%)

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