DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and cdc42l2

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_021325487.1 Gene:cdc42l2 / 556226 ZFINID:ZDB-GENE-060312-21 Length:209 Species:Danio rerio


Alignment Length:179 Identity:101/179 - (56%)
Similarity:128/179 - (71%) Gaps:6/179 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            |..||||||||.||||||||:|: ||.||.|  ||||:..|..||:..:|..:.|::.|||   |
Zfish    25 MSTIKCVVVGDEAVGKTCLLVSF-TNKFPSE--PTVFNTQSVTVMMGGEPYTIRLFNAAGQ---D 83

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLK 130
            :||||:||||||||:|||:|:.:|||||:.||.||:..:.|..|.:||||::|||||..|:.:|.
Zfish    84 QLRPLNYPQTDVFLVCFSVVSLSSFENVKEKWVPEITFYAPKTPFLLVGTQIDLRDDPVTVARLA 148

  Fly   131 DKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCP 179
            ..|..||.......:|:|:.||||:||||||.||||.||||||.:.|.|
Zfish   149 KNKQKPIKPEAAEKLARELKAVKYVECSALTLKGLKNVFDEAILAALQP 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 98/172 (57%)
cdc42l2XP_021325487.1 P-loop_NTPase 27..195 CDD:328724 98/173 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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