DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and rhoua

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001007444.1 Gene:rhoua / 492802 ZFINID:ZDB-GENE-040618-3 Length:254 Species:Danio rerio


Alignment Length:170 Identity:100/170 - (58%)
Similarity:129/170 - (75%) Gaps:0/170 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :|||:|||||||||.|::|||||.:|.||:||.|||::|.|.||.||:.|.|.|||||:::|:||
Zfish    47 VKCVLVGDGAVGKTSLIVSYTTNGYPTEYVPTAFDNFAAVVAVDGKPVKLQLCDTAGQDEFDKLR 111

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKK 133
            ||.|...||||:|||:|:|:||:|||.||.||:|.|||..||:||||:.|||:|.:.:.:|...|
Zfish   112 PLCYTNADVFLLCFSVVSPSSFQNVREKWVPEIRRHCPRAPILLVGTQSDLREDVKVLIQLAQYK 176

  Fly   134 LTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAI 173
            ..|:........|:|:.||.|:||||||||.||.|||.||
Zfish   177 ERPVEPQDASVCAEEVQAVSYMECSALTQKNLKEVFDTAI 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 100/170 (59%)
rhouaNP_001007444.1 Wrch_1 47..219 CDD:133330 100/170 (59%)
RHO 49..221 CDD:197554 99/168 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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