DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and RhoBTB

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster


Alignment Length:215 Identity:80/215 - (37%)
Similarity:114/215 - (53%) Gaps:38/215 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QAIKCVVVGDGAVGKTCLLISYTTN------AFPGEYIPTVF--DNYS--ANVM------VDAKP 50
            :.:|||:|||.|||||.|:.:...|      .....::|||:  |.|.  .:|:      ||...
  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76

  Fly    51 INLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGT 115
            ::|.||||.|  |:|:.|..:|.::||.|:|||:.:|.|..|.:..|:||:|..||.||:||||.
  Fly    77 VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGC 139

  Fly   116 KLDLR------------DDKQTIEK--LKDKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLK 166
            |.|||            .:|.|..:  ||...:.|   .:..|:|||: .|.|.|.|..|..|:.
  Fly   140 KNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMP---DEARAVAKEL-GVAYYETSVFTYFGVN 200

  Fly   167 TVFDEAIRSVLCPVVRGPKR 186
            .||:.||||.|  :.|..:|
  Fly   201 EVFENAIRSAL--IARRQQR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 76/202 (38%)
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 76/203 (37%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Blue background indicates that the domain is not in the aligned region.

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