DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and rhogd

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956974.1 Gene:rhogd / 393653 ZFINID:ZDB-GENE-040426-1504 Length:191 Species:Danio rerio


Alignment Length:192 Identity:128/192 - (66%)
Similarity:155/192 - (80%) Gaps:1/192 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            ||.||||||||||||||||||||||||||.||||||||||||.:.||.:.::|.||||||||:||
Zfish     1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMSVDGRTVSLNLWDTAGQEEYD 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLK 130
            |||.||||||:||:||||:.:|:|..|||.||.|||.||||:|||:|||||.|||.|.:||:|||
Zfish    66 RLRTLSYPQTNVFIICFSIGSPSSLANVRHKWHPEVSHHCPNVPILLVGTKKDLRSDTETIKKLK 130

  Fly   131 DKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHKCALL 192
            ::.|.|.|..||..:.|:|.||:|||||||.|:|::.||.:|:|:||.|:.: ....||.||
Zfish   131 EQGLAPSTQQQGGTLCKQINAVRYLECSALRQEGVRDVFVDAVRAVLYPMTK-KNTKKCVLL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 119/172 (69%)
rhogdNP_956974.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..191 CDD:476819 126/190 (66%)

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