DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rac2 and Rnd1

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001013240.1 Gene:Rnd1 / 362993 RGDID:1306338 Length:232 Species:Rattus norvegicus


Alignment Length:175 Identity:70/175 - (40%)
Similarity:107/175 - (61%) Gaps:3/175 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69
            |.|:|||...|||.:|.....:.:|..|:||||:||:|.:..:.:.:.|.||||:|...||.:||
  Rat    15 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYYDNVRP 79

  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKKL 134
            |.|..:|..|:||.:..|.:.::...||..|:..:|||..::|:|.|.|||.|..|:.:|..:|.
  Rat    80 LCYSDSDAVLLCFDISRPETMDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQ 144

  Fly   135 TPITYPQGLAMAKEIAAVKYLECSALT-QKGLKTVFDEAIRSVLC 178
            .||:|.||.|:||::.|..|||.||.| :..:.::|..|  |::|
  Rat   145 APISYEQGCAIAKQLGAEIYLEGSAFTSETSIHSIFRTA--SMVC 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 68/171 (40%)
Rnd1NP_001013240.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..232 CDD:476819 70/175 (40%)

Return to query results.
Submit another query.