DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rac2 and rhogb

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956334.1 Gene:rhogb / 336933 ZFINID:ZDB-GENE-030131-8877 Length:191 Species:Danio rerio


Alignment Length:192 Identity:126/192 - (65%)
Similarity:154/192 - (80%) Gaps:1/192 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            ||:||||||||||||||||||||||.|||.|||||||||||:.|.||.:.::|.||||||||:||
Zfish     1 MQSIKCVVVGDGAVGKTCLLISYTTGAFPKEYIPTVFDNYSSQVSVDNRTVSLNLWDTAGQEEYD 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLK 130
            |||.||||||:||:||||:.:|.|:||::.||.|||.||||||||:|||||.|||:|...::|||
Zfish    66 RLRTLSYPQTNVFIICFSISSPPSYENIKHKWHPEVTHHCPSVPILLVGTKSDLRNDADVLKKLK 130

  Fly   131 DKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHKCALL 192
            ::...|||..||.|:|::|.||||.|||||:|.|:|.||.:|:|:.|.|.....|: .|.||
Zfish   131 EQNQAPITTQQGQALARQIHAVKYRECSALSQDGIKDVFADAVRAYLSPQPVANKK-PCILL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 118/172 (69%)
rhogbNP_956334.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..191 CDD:476819 124/190 (65%)

Return to query results.
Submit another query.