Protein Alignment Rac2 and cdc42

DIOPT Version :9

• Sequence 1: NP_001261517.1
• Gene: Rac2 / 38831
• FlyBaseID: FBgn0014011
• Length: 192
• Species: Drosophila melanogaster
• Sequence 2: NP_593536.1
• Gene: cdc42 / 2543027
• PomBaseID: SPAC110.03
• Length: 192
• Species: Schizosaccharomyces pombe
• Alignment Length: 192
• Identity: 129/192 - (67%)
• Similarity: 154/192 - (80%)
• Gaps: 0/192 - (0%)

  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            |..|||||||||||||||||||||||.||.:|:|||||||:..||:..:|..|||:|||||||||
pombe     1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYD 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLK 130
            ||||||||||||||:|||:.:|||||||:.||||||.||||.||.::|||::|||||....:||.
pombe    66 RLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLA 130

  Fly   131 DKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHKCALL 192
            .:...|:|:.||..:|:|:.||||:|||||||||||.||||||.:.|.|.|...|:.||.:|
pombe   131 RQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPHKKKSKCLVL 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rac2	NP_001261517.1	Rac1_like	3..176	CDD:206663	121/172 (70%)
cdc42	NP_593536.1	Cdc42	3..177	CDD:206664	121/173 (70%)
		RHO	6..179	CDD:197554	120/172 (70%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000070
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X103
TreeFam	0	0.000	Not matched by this tool.
	4	3.810