DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and crp-1

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_505688.1 Gene:crp-1 / 179462 WormBaseID:WBGene00012532 Length:187 Species:Caenorhabditis elegans


Alignment Length:170 Identity:79/170 - (46%)
Similarity:109/170 - (64%) Gaps:9/170 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :|.|||||...|||.||::||...|...|..|||||::.:|.:|.|...:.|:|||||.:|:::|
 Worm     5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQGNYEQIR 69

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHC-PSVPIILVGTKLDLRDDKQTIEKLKDK 132
            .||||..:|||:|||:::..:.|:.|:.|.||:|.:. .:|||:|||||.||.||       .|.
 Worm    70 CLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVDD-------ADS 127

  Fly   133 KLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEA 172
            :.| :|......:|.||...|:..|||||.||||.||||:
 Worm   128 RNT-VTEDYAKRVAHEIGCHKFYSCSALTHKGLKRVFDES 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 79/170 (46%)
crp-1NP_505688.1 Rho 5..169 CDD:206641 79/170 (46%)
RHO 7..171 CDD:197554 78/168 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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