DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and Rhod

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_031511.1 Gene:Rhod / 11854 MGIID:108446 Length:210 Species:Mus musculus


Alignment Length:185 Identity:91/185 - (49%)
Similarity:123/185 - (66%) Gaps:5/185 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRL 67
            ::|.|:||||..|||.|::.:...|||..|.||||:.|:|.:.:..||::|.:||||||:|||||
Mouse    17 SVKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRL 81

  Fly    68 RPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDK 132
            |||.||..:|.|:||.:.||.||:||..:|:|||.|.|..||||:||.|:|||.||..:..|:.|
Mouse    82 RPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKK 146

  Fly   133 KLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRH 187
            :|.|:||.:|..||:.:.||.||||||.....::.||.||     ..|....:||
Mouse   147 RLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEA-----AEVALSSRRH 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 88/172 (51%)
RhodNP_031511.1 Rho4_like 17..208 CDD:206704 91/185 (49%)
Effector region. /evidence=ECO:0000255 46..54 5/7 (71%)

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