DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rac2 and rhoh

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001120435.1 Gene:rhoh / 100145522 XenbaseID:XB-GENE-950965 Length:190 Species:Xenopus tropicalis


Alignment Length:188 Identity:82/188 - (43%)
Similarity:120/188 - (63%) Gaps:7/188 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65
            |.:||||:|||.|||||.||:.:|:.|||..|.|||::|...:|.:|...|:||||||||.:.:.
 Frog     1 MNSIKCVLVGDAAVGKTALLVRFTSEAFPDSYRPTVYENTGVDVYMDGVQISLGLWDTAGNDAFR 65

  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLK 130
            .:||||....|:.|:|||:.|..||.|||.||..|||.|.|.:|:::|.|:.|.|:       |.
 Frog    66 SIRPLSLQNADIVLLCFSVANHTSFLNVRNKWIGEVRQHLPRIPVLVVATQTDQRE-------LD 123

  Fly   131 DKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHK 188
            ..:|..|....|..:|:::.|..|||||||:.:|::.||:.|:|:.:....:..:||:
 Frog   124 HMRLPCINSIDGKQLAQDVRAKGYLECSALSNRGVQQVFECAVRTAINQAKKRARRHR 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 79/172 (46%)
rhohNP_001120435.1 Rho 4..168 CDD:206641 78/170 (46%)

Return to query results.
Submit another query.