DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and rhoj

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_017952315.1 Gene:rhoj / 100125013 XenbaseID:XB-GENE-957540 Length:214 Species:Xenopus tropicalis


Alignment Length:186 Identity:114/186 - (61%)
Similarity:139/186 - (74%) Gaps:3/186 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            :||||||||||||||||:||..:|||.:|:|||||:|:..:.|..|...|||:|||||||||:||
 Frog    22 LKCVVVGDGAVGKTCLLMSYANDAFPEQYVPTVFDHYAVTITVGGKQYLLGLYDTAGQEDYDQLR 86

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKK 133
            |||||.|||||||||:|||||:.||..:|..|:|...|.||.:|:||::|||||..|:.:|...|
 Frog    87 PLSYPNTDVFLICFSVVNPASYHNVHEEWVSELRACMPHVPYVLIGTQIDLRDDPITLARLLHMK 151

  Fly   134 LTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHKC 189
            ..|||..||:.:||.|.|..|||||||||||||.||||||.:|..|   ..|:.:|
 Frog   152 EKPITQEQGMKLAKMIGAQCYLECSALTQKGLKNVFDEAILTVFHP---KKKKRRC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 110/171 (64%)
rhojXP_017952315.1 Tc10 22..195 CDD:206707 110/172 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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