DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rac2 and rhov

DIOPT Version :10

Sequence 1:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001122131.1 Gene:rhov / 100038217 XenbaseID:XB-GENE-489435 Length:240 Species:Xenopus tropicalis


Alignment Length:188 Identity:102/188 - (54%)
Similarity:129/188 - (68%) Gaps:8/188 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLR 68
            ||||:|||||||||.|:||||.|.:|.||.||..|.:|..|:||..|:.:.|.|||||||:|.||
 Frog    37 IKCVLVGDGAVGKTSLVISYTINGYPTEYQPTALDTFSVQVLVDGAPVRIQLCDTAGQEDFDHLR 101

  Fly    69 PLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKK 133
            .|.|.:|||||:|||:|||:||:||..||.||:|.|.|..||:||||:.|||||...:..|....
 Frog   102 SLCYAETDVFLVCFSVVNPSSFQNVTEKWIPEIRTHSPHTPIVLVGTQADLRDDVNVLINLSRSH 166

  Fly   134 LTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHKCAL 191
            :.|::..|..|:|::|.|..|:||||||||.||.|||.:|.|.:        :||..|
 Frog   167 VKPVSESQAQAVAQKIRAQTYIECSALTQKNLKEVFDASILSAI--------KHKARL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 98/171 (57%)
rhovNP_001122131.1 Wrch_1 37..209 CDD:133330 98/171 (57%)

Return to query results.
Submit another query.