DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rac2 and rhov

DIOPT Version :9

Sequence 1:NP_001261517.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001012250.1 Gene:rhov / 100005849 ZFINID:ZDB-GENE-031002-10 Length:235 Species:Danio rerio


Alignment Length:186 Identity:92/186 - (49%)
Similarity:125/186 - (67%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRL 67
            ||.|::|||||||||.:::|||||.:|.:|..|.||.:|..|.||..|:.:.|.||||||::|..
Zfish    29 AISCMLVGDGAVGKTSMIVSYTTNGYPTDYKQTAFDVFSGQVQVDGTPVRIQLMDTAGQEEFDEF 93

  Fly    68 RPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDK 132
            |.|||..|||||:|||:|||.||:|:..||.||:|...||.|||||||:.||..|...:..|...
Zfish    94 RSLSYAHTDVFLLCFSVVNPTSFQNITKKWIPEIRECNPSSPIILVGTQSDLVLDVNVLIDLDRY 158

  Fly   133 KLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKRHK 188
            |:.|:...:..:::::|.|.:|:||||||||.||..||.||.:.:....|..|:.:
Zfish   159 KVKPVCSSRARSLSEKIRAAEYVECSALTQKNLKEAFDAAIFAAIKHKARKAKKRR 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rac2NP_001261517.1 Rac1_like 3..176 CDD:206663 90/172 (52%)
rhovNP_001012250.1 Wrch_1 30..193 CDD:133330 84/162 (52%)
RHO 32..193 CDD:197554 83/160 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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