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Protein Alignment CG8560 and Cpa5

DIOPT Version :9

Sequence 1:	NP_001261516.1	Gene:	CG8560 / 38830	FlyBaseID:	FBgn0035781	Length:	418	Species:	Drosophila melanogaster
Sequence 2:	NP_653120.1	Gene:	Cpa5 / 74649	MGIID:	1921899	Length:	436	Species:	Mus musculus

Alignment Length:	428	Identity:	133/428 - (31%)
Similarity:	216/428 - (50%)	Gaps:	47/428 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 LLLASVALAVE----NYDGYKIYDINARNAFEKQL-LLR---LSGNEAYDFFDLPR--SLDASSR 63
            ||..:..|||.    |:.|.::..:.|:|  |||| |||   ....:..||:..|.  ||....|
Mouse    21 LLFCNFILAVAWGQVNFTGDQVLRVLAKN--EKQLSLLRDLETQKPQKVDFWRGPARPSLPVDMR 83

  Fly    64 VMVKPEDQEGFEHLLEKYGVNYSVINENFGESLRQERDENQNQRLMNLRSAERSVSFKAFHRHAE 128
            |..  .:....:..|:.:|:.||::.::....|.:|||.....|  .|..:..|.|:.::|...|
Mouse    84 VPF--SELPSVKAYLKSHGLAYSIMIKDIQVLLDEERDAMAKSR--RLERSTNSFSYSSYHTLDE 144

  Fly   129 INAYLDELAAAYPSRVSVQVAGKSYENRDIKTITITNGDGKTGKN--VVFLDAGIHAREWIAHAG 191
            |.:::|...|.:.:.||....|||:|||.|..:..:.|    |.|  .:::|.|||:||||.||.
Mouse   145 IYSWIDNFVAEHSNLVSKIHIGKSFENRSILVLKFSTG----GPNRPAIWIDTGIHSREWITHAT 205

  Fly   192 ALYVIHQLVENFAAN---SELLKDFDWVILPVVNPDGYEYSHTTTRMWRKTRKPISSA----CYG 249
            .:::..::|..:..:   ..:|...|..|..|.||||:.::|:..|:|||.:   ||.    |.|
Mouse   206 GIWISQKIVNAYGKDHVLKRILNTMDIFIEIVTNPDGFAFTHSMNRLWRKNK---SSQPGIFCIG 267

  Fly   250 TDANRNFDFHWGEVGASSYSCSDTFKGETAFSEPETQLIRDILLSLTGRGKF--YLTLHSYGNYL 312
            .|.|||:...:|..|::...||:|::|....||||...|.|.   :||.|.|  .:::|||...:
Mouse   268 VDLNRNWKAGFGGNGSNKNPCSETYRGPAPESEPEVAAIVDF---ITGHGNFKAMISIHSYSQMV 329

  Fly   313 LYPWGWT-SALPSSWRDNDEVAQGGADAIKSAT---GTKYTVGSSTNVLYAAAGGSDDYAFGVAN 373
            :||:|.: ..:|    :::|:.....||:|:..   |.:|..||.:..||:|:|.|.|:|:. :.
Mouse   330 MYPYGHSLEPVP----NHEELFNLAKDAVKALNKVHGIQYIFGSISTTLYSASGISVDWAYD-SG 389

  Fly   374 FPVSITMEL-PAGGTGFNPSTSQIEGFVSETWVGIKAM 410
            ...:.:.|| ..|..||....|||.....|||:.::.:
Mouse   390 IKYAFSFELRDTGQYGFLLPASQIVPTAEETWMALQTI 427

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.